Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0466 ATGAAGATCACTGCACTTTGGGTTCTGGCTTTGCTTGTTTCTGTTTCCGTTGCAGCTGATGATGATGCTGATACAGGCAACCTCAGATTTATCAGATATACAGATGATATCTATGGTAGGTCCTGGCTCAATGTACATATGGACAACACAGAGCGATTCTCCACACCAGAAGCAATTAACAGTGATGTAAAAGAGTATAGACTACCTAGTGAAGTGTTAAGAACTGCAGTGCGATCACTGAATGTTTCGTCTCCCTTATATATCAACTTGACGAGCAGTAATTTTACAGCAGAAAGTGAACACTATGTTTACCTTCATTTTTTTGACTTCGAGGAACATTCTAAGGGACAAGTAAGAAGCATGGAAATTACTTTCACTGATGAGATCCGGGAGACTGTAGTTCTTAAATACCAGGATGTTTATACCTTGGTTAGGAGAATTCCAATAGGGGTTGCCATAAATCGTATTACAATCACATCAACCCCAGATTCTGGTTTACCTCCCATGATCAATGCTTATGAGATTTATGGAGTACTTCCCCAACCAAATACCCCAACTCATGAACAAGTTGTGGACGCTATGAGGGGCATCAAGCATGCTTATAACATCATGAGAATCAGTTGGCAAGGTGATCCCTGCATGCCAATGGAGTATAGATGGGAAGGTGTTACTTGCAATTACTCTGAGAGCATTCCAAGGGTCACTTCTTTAAACATGAGCTCAAGCAAATTGTCAGGACATATTGTAACTTCATTCTCCAATCTCATGACTTTGGAGGCTTTGGATCTGTCAAACAACCAATTAACTGGAGAAATACCAGAATCTTTAGCAGAACTGCCCAATTTGAAACTGCTTAATTTGGAAGGGAATAGTCTCACAGGATCAATTCCCAAGGCTCTGAGGGAGAAGTCATCAACTGCTGATTTAACTTTGATAATTAAGAAAGTATTGTCGTCCAAGAAAGATGGTCAGCTTAAATCAAAGAATCAAGGATTTTCTCAAGCTCAGGTTCATAGTATTACCAATGATTTTGAAACTGAAATTGGAGAAGGGGGATTTGGAAAAGTGTACCTTGGAAGATTAAAAGATGGTTCACAAGTTGCAGTCAAGTTACTTTCTAAGTCATCACAGCAAGGGTTTAAAGAGTTTCAATCAGAGGCAAAACTGTTGTCCTTTATTTATCATAAAAACCTTGTTTCTCTTGTTGGCTTTTGTGATGACGGTGACATGAGAGCACTGATTTATGAATACATGGCAAAGGGAAATCTCCGGAACCTACTGTCAGATAAGAACCGAGATATTTTGAAGTGGAATGAGAGACTTCAAATTGCATTGGATGCAGCATGTGGATTGGACTATCTGCATAATGGTTGTAAGCCACCAATAATCCACAGGGACCTAAAATCTTCAAACATCTTGCTAAGTGAAAACATGCAAGCCAAGATTGCTGATTTCGGACTATCTAAAGCTTTTGCGAATGATACTGACACTCACATTTCAACTCGCCCGGCAGGCACATTTGGTTACCTCGACCCTGAGTTCCATAGATCTGGAAACTTGAACAAAAAAAGCGATGTTTATAGTTTTGGGATAATTCTGCTGGAGCTAATGACAGGACAGCGAGCAATAACCTTAACATCAGATGGCACACGTCACATATCTGATTGGGTCAATCCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAGGCAAATTCAGTACAGCTTCAGCATGGAAGTTTCTAGAGATAGCCATGTCTTGCATTACACCAGCAGCAATCAAAAGACCAGATATAAGTTCTGTTGTAATTGATCTAAAGCAGGGTTTGGCTATGGAAACTTCACTTGAAAGTGCAGAAAGCAGCAGTTTTATCTCAAGCAGTACATTGGAAACAAGTTATTCTCAGTCTGGATCGTACTCACCTCCATCCGCTAGATAG 1956 0.4013 MKITALWVLALLVSVSVAADDDADTGNLRFIRYTDDIYGRSWLNVHMDNTERFSTPEAINSDVKEYRLPSEVLRTAVRSLNVSSPLYINLTSSNFTAESEHYVYLHFFDFEEHSKGQVRSMEITFTDEIRETVVLKYQDVYTLVRRIPIGVAINRITITSTPDSGLPPMINAYEIYGVLPQPNTPTHEQVVDAMRGIKHAYNIMRISWQGDPCMPMEYRWEGVTCNYSESIPRVTSLNMSSSKLSGHIVTSFSNLMTLEALDLSNNQLTGEIPESLAELPNLKLLNLEGNSLTGSIPKALREKSSTADLTLIIKKVLSSKKDGQLKSKNQGFSQAQVHSITNDFETEIGEGGFGKVYLGRLKDGSQVAVKLLSKSSQQGFKEFQSEAKLLSFIYHKNLVSLVGFCDDGDMRALIYEYMAKGNLRNLLSDKNRDILKWNERLQIALDAACGLDYLHNGCKPPIIHRDLKSSNILLSENMQAKIADFGLSKAFANDTDTHISTRPAGTFGYLDPEFHRSGNLNKKSDVYSFGIILLELMTGQRAITLTSDGTRHISDWVNPKLENGDIQAIVDPRLEGKFSTASAWKFLEIAMSCITPAAIKRPDISSVVIDLKQGLAMETSLESAESSSFISSSTLETSYSQSGSYSPPSAR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0466 651 Pfam Protein tyrosine and serine/threonine kinase 344 609 IPR001245 GO:0004672|GO:0006468
Lele43g0466 651 ProSiteProfiles Leucine-rich repeat profile. 257 280 IPR001611 GO:0005515
Lele43g0466 651 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 418 624 - -
Lele43g0466 651 SUPERFAMILY Protein kinase-like (PK-like) 328 611 IPR011009 -
Lele43g0466 651 Gene3D Ribonuclease Inhibitor 189 311 IPR032675 -
Lele43g0466 651 FunFam serine/threonine-protein kinase PBS1-like 313 417 - -
Lele43g0466 651 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Lele43g0466 651 ProSiteProfiles Protein kinase domain profile. 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0466 651 PANTHER OS07G0107800 PROTEIN-RELATED 29 615 - -
Lele43g0466 651 MobiDBLite consensus disorder prediction 623 651 - -
Lele43g0466 651 Pfam Malectin-like domain 29 177 IPR024788 -
Lele43g0466 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lele43g0466 651 FunFam Leucine-rich repeat receptor-like kinase 189 316 - -
Lele43g0466 651 PRINTS Leucine-rich repeat signature 258 271 - -
Lele43g0466 651 PRINTS Leucine-rich repeat signature 279 292 - -
Lele43g0466 651 CDD STKc_IRAK 348 613 - -
Lele43g0466 651 Gene3D Phosphorylase Kinase; domain 1 348 418 - -
Lele43g0466 651 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0466 651 Pfam Leucine rich repeat 232 292 IPR001611 GO:0005515
Lele43g0466 651 Gene3D Transferase(Phosphotransferase) domain 1 419 633 - -
Lele43g0466 651 SUPERFAMILY L domain-like 215 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0466 Lele-ChrLele43 4089828 4095876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0466 29 640 Receptor kinase-like Gene Family AT3G46400 40.413 1.31e-160 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0466 PK_Tyr_Ser-Thr 4.4e-50 CL0016