Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0464 ATGAAGATGGCACCAATATGGATCATGGCTTTGGTTGTGTGTGTTTCTTCTACCATCGACCTTCGAAATTCAGCAAAAGTTGTTCCATCAGATGCTGGTGGTTCTGATACACACCGGGTGATAAGCATTGATTGTGGTGTAACCCAAGACATTTGGGATGCAAATCGATTCTTTCATGAGGCAGATGACGCAGAGTATGCACATGATGTCTATGGTAGGTCCTGGTTCAATGTACATATCGACAACACAGAGCGATTCTCCACACCAGAAGCAATTAACAGTGATGTGAAAGCATACAGACTACCTGATGAAGTGCTAACAACGGCAATACGACCAAAGTATAATTCGCCTTCCTTATATATCAACTTGAACTCGATTAATTTTACAGCAGATAGCGAACACTATGTTTACCTTGATTTTTGTGATTTCGATGAGCATTCTAAGGGTCAAGTAAGAAGCATGCAAATCACTTTCACTGATGAGATCCGAGACAATGTATCTCTTAACTACCAGGATGTTTATACCTTGGTTAAGAGAATTCCAAAGGGGGTTCTTGTTGATCGAATCCATGATGATCTCAGCTTGGATGGAAATCCCGGTCTCTGTCGGAAGGGCTCTTGCAAAAACACTACAAAAATGTTCATAAAACCACTTGTTGCATCTGTAGCTTCTGTAGCGGTTCTTGCAATAATAGCCTACATTTCTTTGATTCTCTACAAAAATAAACATGTTACTGATACAAAAGCATTGTTTTCCAAGAAATATATTGATCAGCTTAAATCAAAAAGTCAAGGGTTTTCTCAAGCTGAAGTTCTTGGTATTACCAATGACTTTGAAACTGAAATTGGAGGAGGGGGATTTGGAAAAGTGTACCTCGGAAGACTAAACGATGGTACTCAAGTTGCAGTCAAGTTACTTTCTCAGTCATCACAGCAAGGCTTTAAGGAGTTTCTATCAGAGGCAAAACTATTATCCATTATGTATCATAGAAATCTTCTTTCTCTTGTTGGCTATTGTGATGATGGGGACATGAAAGCTCTGATTTATGAATACATGGCAAAGGGAAATCTCCAGAACCTACTGTCAGATAAGACCCCAAATATTTTGAACTGGAATGAGAGACTTCAAATTGCATTGGATACAGCATGTGCGTTTGCCAATGAAACTGACACTCATATTACAACTCGCCCGGCAGGCACATTTGGTTACATCGACCCTGAATTCCATAGATCTGGAAACTTGAGAAAGAAAAGCGATGTTTATAGTTTTGGGGTAATTCTGCTCCAGCTAATGACTGGCCAACAAGCAATAACCAGAACGTCTGAAGGCACACGTCACATATCTGATTGGGTCAAACCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCACGATTAGAAGGAAAATTCAGTAGTTCTTCAGCATGA 1434 0.4003 MKMAPIWIMALVVCVSSTIDLRNSAKVVPSDAGGSDTHRVISIDCGVTQDIWDANRFFHEADDAEYAHDVYGRSWFNVHIDNTERFSTPEAINSDVKAYRLPDEVLTTAIRPKYNSPSLYINLNSINFTADSEHYVYLDFCDFDEHSKGQVRSMQITFTDEIRDNVSLNYQDVYTLVKRIPKGVLVDRIHDDLSLDGNPGLCRKGSCKNTTKMFIKPLVASVASVAVLAIIAYISLILYKNKHVTDTKALFSKKYIDQLKSKSQGFSQAEVLGITNDFETEIGGGGFGKVYLGRLNDGTQVAVKLLSQSSQQGFKEFLSEAKLLSIMYHRNLLSLVGYCDDGDMKALIYEYMAKGNLQNLLSDKTPNILNWNERLQIALDTACAFANETDTHITTRPAGTFGYIDPEFHRSGNLRKKSDVYSFGVILLQLMTGQQAITRTSEGTRHISDWVKPKLENGDIQAIVDPRLEGKFSSSSA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0464 477 FunFam receptor-like protein kinase FERONIA 240 351 - -
Lele43g0464 477 Gene3D Transferase(Phosphotransferase) domain 1 258 384 - -
Lele43g0464 477 SUPERFAMILY Protein kinase-like (PK-like) 262 474 IPR011009 -
Lele43g0464 477 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Lele43g0464 477 ProSiteProfiles Protein kinase domain profile. 276 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0464 477 Pfam Protein tyrosine and serine/threonine kinase 278 385 IPR001245 GO:0004672|GO:0006468
Lele43g0464 477 Gene3D Transferase(Phosphotransferase) domain 1 385 477 - -
Lele43g0464 477 Pfam Malectin-like domain 63 175 IPR024788 -
Lele43g0464 477 PANTHER OS07G0107800 PROTEIN-RELATED 180 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0464 Lele-ChrLele43 4060076 4067522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0464 185 477 Receptor kinase-like Gene Family AT2G19230 40.762 1.12e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0464 PK_Tyr_Ser-Thr 1.8e-19 CL0016