LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0463	ATGAAGATCACTGCACTTTGGGTTCTGGCTTTGCTTGTTTCTGTTTCTGTTTCCGTTGCAGCTGGTGATGATGCTGATACAGGCAGGGAGATAAGCATTGATTGTGGGGTTACTCAAGAAAGTCAGGACACAAATGGATTTCATCATGAGGCAGATAATGCAGAGGTACATATGGACAACACAGAGCGATTCTCCACACCAGAAGCAATTAACGGTGATCTAAAAGAGTATAAACTACCTAGTGAAGTGTTAAGAACTGCAGTGCGATCACTGAATGTTTCATCTCCCTTATATATCAACTTGAAGAGCAGTTATTTTACACCAGAAAGTGAACACTATGTTTACCTTCATTTTTTTGACTTCGAGGAACATTCTAAGGGTCAAGTAAGAAGCATGGAAATTACTTTCACTGATGAGATCCGGGAGACTGTAGTTCTTAAATACCAGGATGTTTATACCTTGGTTAAGAGAATTCCAAGAGGGGTTGCCATAAATCTATTGTCTTCCAAGAAAGATGGTCAGCTTAAATCAAAGAATCAAGGATTTTCTCAAGCTCAAGTTCATAGTATTACCAATGACTTTGAAACTGAAATTGGAGAAGGGGGATTTGGAAAAGTGTACCTTGGAAGACTAAAAGATGGTTCACAAGTTGCAGTCAAGTTACTTTCTAAGTCATCACAGCAAGGGTTTAAAGAGTTTCAATCAGAGGCAAAACTGTTGTCCTTTATTTATCATAAAAACCTTGTTTCTCTTGTTGGCTTTTGTGATGATGGTGACATGAGAGCACTGATTTATGAATACATGGCAAAGGGAAATCTCCGGAACCTACTGTCAGATAAGAACCCAGATATTTTGAAGTGGAATGAGAGACTTCAAATTGCATTGGATGCAGCATGTGGATTGGACTATCTGCATAATGGTTGTAAGCCACCAATAATCCACAGGGACCTAAAATCTGCAAACATCTTGCTAAGTGAAAACATGCAAGCCAAGATTGCTGATTTCGGACTATCTAAAGCTTTTGCGAATGATACTGACACTCACATTTCAACTCGCCCGGCAGGCACATTTGGTTACCTCGACCCAGATTTTGGGATAATTCTGCTGGAGCTAATGACAGGACAGAGAGCAATAACCGTAACATCAGATGGCACACGTCACATATCTGATTGGGTCAATCCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAGGCAAATTCAGTACAGCTTCAGCATGGAAGTTTCTAGAGATAGCCATGTCTTGCATTACGCCAGCAGCAATAAAAAGACCAGATATAAGTTCTGTTGTAATTGATCTAAAGCAGGGTTTGGCTTTGGAAACTTCCCTTGAAAGTGCAGAAAGCAGCAGTTTTATCTCAAGCACTACATTGGAAACAAGTTATTCTCAGTCTGGATCGTACTCACCTCCATCCGCTAGATAG	1461	0.4031	MKITALWVLALLVSVSVSVAAGDDADTGREISIDCGVTQESQDTNGFHHEADNAEVHMDNTERFSTPEAINGDLKEYKLPSEVLRTAVRSLNVSSPLYINLKSSYFTPESEHYVYLHFFDFEEHSKGQVRSMEITFTDEIRETVVLKYQDVYTLVKRIPRGVAINLLSSKKDGQLKSKNQGFSQAQVHSITNDFETEIGEGGFGKVYLGRLKDGSQVAVKLLSKSSQQGFKEFQSEAKLLSFIYHKNLVSLVGFCDDGDMRALIYEYMAKGNLRNLLSDKNPDILKWNERLQIALDAACGLDYLHNGCKPPIIHRDLKSANILLSENMQAKIADFGLSKAFANDTDTHISTRPAGTFGYLDPDFGIILLELMTGQRAITVTSDGTRHISDWVNPKLENGDIQAIVDPRLEGKFSTASAWKFLEIAMSCITPAAIKRPDISSVVIDLKQGLALETSLESAESSSFISSTTLETSYSQSGSYSPPSAR	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0463	486	SUPERFAMILY	Protein kinase-like (PK-like)	179	446	IPR011009	-
	Lele43g0463	486	FunFam	Os07g0541700 protein	268	356	-	-
	Lele43g0463	486	MobiDBLite	consensus disorder prediction	463	486	-	-
	Lele43g0463	486	Pfam	Malectin-like domain	58	154	IPR024788	-
	Lele43g0463	486	PANTHER	OS07G0107800 PROTEIN-RELATED	165	450	-	-
	Lele43g0463	486	Gene3D	Phosphorylase Kinase; domain 1	198	268	-	-
	Lele43g0463	486	FunFam	serine/threonine-protein kinase PBS1-like	165	267	-	-
	Lele43g0463	486	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	312	324	IPR008271	GO:0004672\|GO:0006468
	Lele43g0463	486	Pfam	Protein tyrosine and serine/threonine kinase	194	348	IPR001245	GO:0004672\|GO:0006468
	Lele43g0463	486	ProSitePatterns	Protein kinases ATP-binding region signature.	198	220	IPR017441	GO:0005524
	Lele43g0463	486	Gene3D	Transferase(Phosphotransferase) domain 1	269	464	-	-
	Lele43g0463	486	ProSiteProfiles	Protein kinase domain profile.	192	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g0463	486	SMART	serkin_6	192	452	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0463	Lele-ChrLele43	4051030	4057365	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g0463	175	457	Receptor kinase-like Gene Family	AT4G29180	50.321	5.72e-97	310

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Lele43g0463		PK_Tyr_Ser-Thr	6.3e-38	CL0016