Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0462 ATGAAGAGCACAACACTATGGAATATTGCGGTTTTGGTGGTTGTGTTTGTTTGGTCTATCATGATTCTCAGAGAAGCACAGGTTGTTGCAGATGGTGATGACTCAGGTAAGAAAATGACTCAGCTGAGATCAAAAAATCAGGCATTTTGCCGCGCTGAAATTTGCAGTATTACTAATAACTTTGAAATTGTAATTGGAGAAGGAGGATTTGGAAGAGTGTACCTTGGTAAACTGCAAGATGGCACCCAAGTTGCCATCAAGTTACTTTCTAAGTCATCACAACAAGGATTTAAGGAATTTCATTCCGAGGCCGAGTTGTTGACCATTGTTCATCACAAAAATTTGGTTTCTCTCATTGGCTTCTGTGATGATGGTGACATGAAAGCCTTGGTTTATGAATATATGTCTGAGGGAAATCTCCGATATTTACTCTCTGATAAGAGCCAATATGTTTTGAAGTGGAGTGAGAGACTTCAAATTGCATTGGATGCAGCTTGTGGCACAATCGGTTACCTTGATCCTGAATTTCATAGCTCTGGGAACATGAACAAGAAAAGTGATGTCTATAGTTTTGGGATAATCTTACTCGAGTTAATAACGGGTCGACCAGCAGTAACAGGAACGCGAGGCAACACGAGTCACATATATGATTGGGTAACTCCAAAGCTGGAGAATGGAGATATAGAGTCCATTATGGATCCAAGGTTAAAGGGAAAATCCAACTCAGAATCAGCTTGGAAGTTCTTAGAGATAGCCATGACTTGTGTTCCACCAATTGCAATTCAAAGGCCTGATATAAGTCATGTTGTGAGTGACCTAAAGGAATGTTTGGCACTTGAGCTATCCCTTGGAAATTCATCAGAAGGTGACGATGGTAGAATCTTCAACACTACCTTCGATATTTGTTACGTTTCACTTGAATCTGATCTCTCTACTCTATATGCTAGTGAAGATATTAAACATGAACTTGCTTTTGCAGAAGGCTGTAATTATTCCACGTCTTCTTGTGCTGTGACTAGTGTGAAAGTTGTTGTCAAAGTGAGCTACCCAACAAATGCTACTCAGTTCAGATTCCGTAGCTCTGGGAACCTGAATAAGAAAAGCGATGTTTATAGTTTTGGGATAATTCTACTCGAGCTTATGACCAGTAGGTCGGCAGTAACAGGAACACCTGGCAACACAAATCACATATCAGATTGGGTGGCTCCAAAGCTGGAGAGTGGGGACATGAAAGCGATTATGGATACGAGATTAGAAGGAAAATTCCATAGTGCTTCAGCATGGAAATTTCTAGAGATAGCCATGTCTTGCATTCCACCAGTTGCAATTCAAAGGCCCGATATAGGACTTGTTGTAGCTGATTTAAAGGAATGTTTGGCCTTGGAAACATCCCTTCAAAGTGCTGAACGTAACAGTGCAATTTCTGGCTCTCCATTGAGCAACACTTATTTTCCACTTGAATCAAACTCAGCTCCATGTGCTAGCCATGGTGGTTCAGTTCTGTCTCTGGTTGTTGAACTGCTATAA 1527 0.4086 MKSTTLWNIAVLVVVFVWSIMILREAQVVADGDDSGKKMTQLRSKNQAFCRAEICSITNNFEIVIGEGGFGRVYLGKLQDGTQVAIKLLSKSSQQGFKEFHSEAELLTIVHHKNLVSLIGFCDDGDMKALVYEYMSEGNLRYLLSDKSQYVLKWSERLQIALDAACGTIGYLDPEFHSSGNMNKKSDVYSFGIILLELITGRPAVTGTRGNTSHIYDWVTPKLENGDIESIMDPRLKGKSNSESAWKFLEIAMTCVPPIAIQRPDISHVVSDLKECLALELSLGNSSEGDDGRIFNTTFDICYVSLESDLSTLYASEDIKHELAFAEGCNYSTSSCAVTSVKVVVKVSYPTNATQFRFRSSGNLNKKSDVYSFGIILLELMTSRSAVTGTPGNTNHISDWVAPKLESGDMKAIMDTRLEGKFHSASAWKFLEIAMSCIPPVAIQRPDIGLVVADLKECLALETSLQSAERNSAISGSPLSNTYFPLESNSAPCASHGGSVLSLVVELL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0462 508 SUPERFAMILY Protein kinase-like (PK-like) 363 462 IPR011009 -
Lele43g0462 508 SUPERFAMILY Protein kinase-like (PK-like) 47 273 IPR011009 -
Lele43g0462 508 Gene3D Transferase(Phosphotransferase) domain 1 337 476 - -
Lele43g0462 508 Gene3D Transferase(Phosphotransferase) domain 1 162 287 - -
Lele43g0462 508 Pfam Protein tyrosine and serine/threonine kinase 63 168 IPR001245 GO:0004672|GO:0006468
Lele43g0462 508 Pfam Protein tyrosine and serine/threonine kinase 170 273 IPR001245 GO:0004672|GO:0006468
Lele43g0462 508 ProSiteProfiles Protein kinase domain profile. 59 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0462 508 FunFam Leucine-rich repeat receptor-like protein kinase 37 134 - -
Lele43g0462 508 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Lele43g0462 508 Gene3D Phosphorylase Kinase; domain 1 65 136 - -
Lele43g0462 508 PANTHER OS07G0107800 PROTEIN-RELATED 360 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0462 Lele-ChrLele43 4039904 4048877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0462 364 460 Receptor kinase-like Gene Family AT2G19210 39.394 2.60e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0462 PK_Tyr_Ser-Thr 6.9e-06 CL0016