Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0456 ATGGGAAACGCCATAGAGAAGTCGATGAACCAGATCATAAAACTGAAATTCACCTCCAAGCAATTTCAACGCCAAGCCCGTAAGTGCCAGAAGGAAGAGAAATCCGAGAAGCTGAAGGTCAAGAAAGCCATGGAGAAAGGCAACATGGACGGAGCTCGCATCTACGCCGAGAACGCCATTCGAAAGCGAACCGAGCAGATGAACTGTCTGCGCCTCGCCTCCCAGCTTGACGCCGTCGTGGCTTGGCTTGAAACCCAAGCCAAGATGAGCACCATCAACAAGTCGATGACTAATATCGTCAAGTCTCTGGAATCGTCCTTGGCTACCGGGAATCTCCAGAAGATGTCGGAGACAATGGACTCTTTCGAGAAGCAGTTTGTGAATATGGAGGTTCAAGCTGAGTTCATGGAGAGCACCATGGCTGGATCCACCTCGCTTTCCACTCCTGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCCGATGATTATGGCCACGAGGTCTCGGTGGGTCTGCCGCTGCTGGCAACTCAGGTGATGCCGACTGAGGAGACGGAGAAGGTGGACGATGATGACTTGTATAGGCGGTTTGCTGAGCTTAAGGCTTTAAGATAG 615 0.5171 MGNAIEKSMNQIIKLKFTSKQFQRQARKCQKEEKSEKLKVKKAMEKGNMDGARIYAENAIRKRTEQMNCLRLASQLDAVVAWLETQAKMSTINKSMTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESTMAGSTSLSTPEGEVNSLMQQVADDYGHEVSVGLPLLATQVMPTEETEKVDDDDLYRRFAELKALR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0456 204 Pfam Snf7 12 173 IPR005024 GO:0007034
Lele43g0456 204 Coils Coil 112 132 - -
Lele43g0456 204 Gene3D - 4 173 - -
Lele43g0456 204 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 14 201 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0456 Lele-ChrLele43 3999289 3999903 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0943 41 18947521 18948132 Lele43g0456 43 3999289 3999903 hybridization
Lele42g0912 42 21868968 21869579 Lele43g0456 43 3999289 3999903 hybridization