Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0443 ATGCCGACGGTGGAGGGCGGAATGGAGGCTGGAGTCGTGATGATGATGATGACCCGACGATGGGGGTTGAAGTTGGAAAGAGACGTGAATGGAGGTGATGACGATGGTCTAGACGCGGAAGGGAGTGGAAGAAAAAACAATGCAAGTGACAGCCACAGAAAAGGATGGGTTTGTGCAGTTGTCTCAGTCTGTTGTGCTCTCATAAGCATTGCATATTTCAATAATGGTCTCTGGTGCCTTATTTCCAAATCTGAAGACTTTAGGAAGCCGGGGCGGCTAAGATCTAAATGTATACAAGTTCTAAACCTTGTTTGGTGGGTCTCTTCATGCATACTTGATTCAGCTCTCAATACTGAGATTCTGTTCAAAGAGCATAACATTCAAATACTTGATCTGGTCCAATGGCCCGTGCATTTTTCACTTGTTTTCTGTGCCTTCCAAAGCCTTTATTTTGCACCTCAAAGCACTGAAAATACCACTATGTCAGAGCCTCTTTTAGCTCAGAAGGATGAAAATAAACAATCAAAACTTGCACGTGCCAATTTTCTCAGTAAATTGACTTTCTCATGGATTAATCCCTTATTGAATTTGGGATATTCAAAGCCATTAGCTCTTGAAGACATCCCATCTCTTGTTTCTGAAGATGAAGCTTCTTTAGCCTACCAAAAGTTTTCTCATATGTGGGATTCCTATTCAAGGCATAGGACACAAAGCAATAGTACCAAAAATTTGGTCATGTGGTCTATATCAAGGGTTTACTTGAAAGAGAACATTCTCATAGCAAGCTTGGCATTGCTCAGAACAATTTCTGTACTACTTTCTCCTTTGTTGCTCTATGCTTTTGTGAACTATTCAAAAACTAAAGAGGACAATCTAAGGGAGGGTCTTGCCATAATCATTCAGAAGTGTCAGTCAGAATTTATGGTTGCACAGGATGAACGTCTAAGGTCAACTTCAGAGATACTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACCTTGGTAGAAAGCCTTCGTGCCAAAGAGTTCAAGTGGCTGGCTAAGGCACAGCTCTTAAAAGCTCATGGATCATTTGTATATTGGATGTCTCCAACGATTGTTTCCTCTATAATCTTCCTAGGATGTGCTCTTCTGCAAAGTTCCCCTTTAAATGCTGGAGCCATATTCACTATTCTTGCTACTTTGAGAACCATGAGTGAACCTGTTAGAACTATTCCAGAGGCTCTTTCTGTTATAATCCAAGTGAAGGTCTCCTTTGATCGTCTCAACACCTTTTTGCTTGATGATGAGCTAAATGATGATGTCACTAGAAGAAACTTGATGCAAAATTCAGTTAACAGTGTGGAAATTCAAGCTGGTAACTTTAGTTGGGATCCGGAGTCGATGTCTCCAACTTTGAGAGATTTGAAAGTAGAAATCAAATGGGGACAGAAAATTGCAGTTTGTGGACCAGTTGGAAGTGGAAAATCATCCTTGATACATGCAATTCTCGGAGAGATACCCAAAATTTCAGGAACTGTTAACGTGGGTGGAACAGTTGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGAGATAATATACTATTTGGAAAACCGATGGATGAAACCAGATATGAGAATGCCATAAAAGTCTGTGCCTTGGATAAGGATATGAATGCTTTTAGCCATGGTGATCTTACAGAAATTGGTCAGCGAGGGATCAACTTGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCAGTATATAACGATGCTGATGTTTATCTCTTAGATGACCCTTTCAGTGCAGTGGATGCACATACTGCTGCTATTCTATTCAATGATTGCGTCATGACTGCTCTATGGAAGAAAGCTGTCCTTCTAGTGACTCATCAAGTGGAGTTTCTCTCACAAGTTGATAAAATCCTTGTCATGGATGGTGGTGTAGTTACTCAATCAGGATGTTATGACGATCTTCTGACAGAAGGGAAAGTCTTTGAAAACCTTGTGAATGCCCATAGAGAAGCTATTTCAGGGTCAGATCAAAACAATGAAATCCCAGGAGATTTTGAAGATGTAATAAACGTTCTTCAGCCATTGGAGTCTCATGGATTTCACCTCTCTGAGGATCATAAGACCGAGGAGGTTTCTACCAAAGGTCAGGTGTCACAACTTACACAAGAAGAAGAGAAGGAGGTTGGAGATGTTGGCTGGAAGCCATTTTGGGACTATATTTATCTCTCCAGTGGATCACTACTTCTGTGTTTCACCATTTTAGCACAGGTGGCTTTTATTGGCTTGCAAGCAGCATCCACTTTTTGGCTTGCTCTAGCAATTGAAGTGCCAAAAGTAACAAATGGCATCTTGATTGGAGTTTACACAATGGTTTCACTTCTAGGTGTTGGCTTTGTGTGGCTAAGATCTATCGTGGGTGCACATCTGGGATTAAAGGCTTCTACTTCTTTCTTCTCTGGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTCTTCTTTGACTCAACCCCAGTAGGGAGAATTTTTACCCGAGCTTCATCAGATTTAAGTACATTAGACTTAGATATACCGTATGGACTCACCTTTGCAACAGCTGGTGCATTGGAACTTCTGACAATAACTGGGATAATGGCTTCAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCACCTTAATAACTTCTAAATACATTCAGGGCTATTATGAAGCCTCTGCAAGGGAACTCATGAGAATCAATGGAACCACAAAAGCTCCAGTCATGAATTTTGCCAGCGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACATGGCAGACAGATTTTACCAAAATTACCTCAAGCTTGTGGACACAGATGCAAAACTATTTTTTCATTCTAATGTGGCCACAGAATGGTTAATTTTAAGGATTGAAGTACTTCAGAATTTGACACTCTTCACAGCAGCTTTACTGCTTGTTCTACTCCCAAAGGGACTTGTGTCCCCAGGCCTTGCAGGACTCTCTCTATCATATGCTTTGTCATTGACAGCATGCCAAAATTTTACAAGTCGTTGGTTCTGCAACTTATCAAATAATATTGTTTCCGTAGAAAGAATTAAGCAATTCATTCACATTCCAGAAGAACCTCCTGCAGTTGTGGAGAACAGAAAACCTCCTCTTTCATGGCCTTCCACTGGTAGGATTGAGCTTCAAAATCTTGAGATAAGGTATCGTCCAAGTGCTCCATTAGTCCTTAAGGGAATTACTTGTACATTTAAAGAAGGAAGCAGAGTGGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGCTTTAGAGAAATGTCAGCTCAAGTCAACAATCAGGAGGCTACCAAATCTATTGAACTCTTCTGTGACTGATGGTGGTGAAAATTGGAGTATGGGACAACGTCAACTACTATGCCTAGGAAGAGTACTTCTGAAGAGAAATAAGATTCTTGTTCTTGATGAAGCCACTGCTTCTATTGATTCTACAACAGATGCCATTCTACAAAGAGTTATCAGACAAGAATTTGCAGGGTGTACAGTTATAACTATAGCTCATCGAGTTCCAACTGTAATAGACAGTGATATGGTTGTAATCCTCTCTTATGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTTATGGAGACAAACTCTTCTTTCTCTAAGCTTGTTGCTGAGTATTGGTCGAGCCGCAACAAGGACCTCTCCTAA 3759 0.4084 MPTVEGGMEAGVVMMMMTRRWGLKLERDVNGGDDDGLDAEGSGRKNNASDSHRKGWVCAVVSVCCALISIAYFNNGLWCLISKSEDFRKPGRLRSKCIQVLNLVWWVSSCILDSALNTEILFKEHNIQILDLVQWPVHFSLVFCAFQSLYFAPQSTENTTMSEPLLAQKDENKQSKLARANFLSKLTFSWINPLLNLGYSKPLALEDIPSLVSEDEASLAYQKFSHMWDSYSRHRTQSNSTKNLVMWSISRVYLKENILIASLALLRTISVLLSPLLLYAFVNYSKTKEDNLREGLAIIIQKCQSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTLVESLRAKEFKWLAKAQLLKAHGSFVYWMSPTIVSSIIFLGCALLQSSPLNAGAIFTILATLRTMSEPVRTIPEALSVIIQVKVSFDRLNTFLLDDELNDDVTRRNLMQNSVNSVEIQAGNFSWDPESMSPTLRDLKVEIKWGQKIAVCGPVGSGKSSLIHAILGEIPKISGTVNVGGTVAYVSQTSWIQSGTIRDNILFGKPMDETRYENAIKVCALDKDMNAFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDADVYLLDDPFSAVDAHTAAILFNDCVMTALWKKAVLLVTHQVEFLSQVDKILVMDGGVVTQSGCYDDLLTEGKVFENLVNAHREAISGSDQNNEIPGDFEDVINVLQPLESHGFHLSEDHKTEEVSTKGQVSQLTQEEEKEVGDVGWKPFWDYIYLSSGSLLLCFTILAQVAFIGLQAASTFWLALAIEVPKVTNGILIGVYTMVSLLGVGFVWLRSIVGAHLGLKASTSFFSGFNNAIFKAPMLFFDSTPVGRIFTRASSDLSTLDLDIPYGLTFATAGALELLTITGIMASVTWQVLIVAVPTLITSKYIQGYYEASARELMRINGTTKAPVMNFASETSLGVVTVRAFNMADRFYQNYLKLVDTDAKLFFHSNVATEWLILRIEVLQNLTLFTAALLLVLLPKGLVSPGLAGLSLSYALSLTACQNFTSRWFCNLSNNIVSVERIKQFIHIPEEPPAVVENRKPPLSWPSTGRIELQNLEIRYRPSAPLVLKGITCTFKEGSRVGIVGRTGSGKSTLALEKCQLKSTIRRLPNLLNSSVTDGGENWSMGQRQLLCLGRVLLKRNKILVLDEATASIDSTTDAILQRVIRQEFAGCTVITIAHRVPTVIDSDMVVILSYGKVVEYDEPSKLMETNSSFSKLVAEYWSSRNKDLS 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0443 1252 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 677 IPR003439 GO:0005524
Lele43g0443 1252 FunFam Multidrug resistance protein associated1 433 696 - -
Lele43g0443 1252 Pfam ABC transporter transmembrane region 793 1018 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0443 1252 Pfam ABC transporter transmembrane region 299 407 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0443 1252 Gene3D - 430 692 IPR027417 -
Lele43g0443 1252 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 297 1118 - -
Lele43g0443 1252 Gene3D ABC transporter type 1, transmembrane domain 721 1054 IPR036640 GO:0005524|GO:0016020
Lele43g0443 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1063 1241 IPR027417 -
Lele43g0443 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 677 IPR027417 -
Lele43g0443 1252 CDD ABCC_MRP_domain1 454 653 - -
Lele43g0443 1252 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 958 1242 IPR003439 GO:0005524
Lele43g0443 1252 SUPERFAMILY ABC transporter transmembrane region 746 1055 IPR036640 GO:0005524|GO:0016020
Lele43g0443 1252 SUPERFAMILY ABC transporter transmembrane region 300 434 IPR036640 GO:0005524|GO:0016020
Lele43g0443 1252 FunFam ABC transporter C family member 5 722 1054 - -
Lele43g0443 1252 Gene3D - 1056 1117 IPR027417 -
Lele43g0443 1252 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 296 420 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0443 1252 Pfam ABC transporter 472 606 IPR003439 GO:0005524
Lele43g0443 1252 CDD ABC_6TM_ABCC_D2 755 1048 IPR044726 GO:0140359
Lele43g0443 1252 ProSitePatterns ABC transporters family signature. 579 593 IPR017871 GO:0005524|GO:0016887
Lele43g0443 1252 Gene3D - 1118 1250 IPR027417 -
Lele43g0443 1252 Gene3D ABC transporter type 1, transmembrane domain 258 429 IPR036640 GO:0005524|GO:0016020
Lele43g0443 1252 Pfam ABC transporter 1130 1173 IPR003439 GO:0005524
Lele43g0443 1252 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 761 1036 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0443 1252 SMART AAA_5 1099 1226 IPR003593 -
Lele43g0443 1252 SMART AAA_5 481 645 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0443 Lele-ChrLele43 3893507 3903211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0443 454 770 Calmodulin-binding Proteins AT2G36910 25.000 3.04e-24 108