Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0441 ATGAGTCGAGAACAAGAGAAGCGAGGGAAGCAGGAAAAAGGCTCCGATGCTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTCGTTTGGTCTTTAACTCATGTTGTTCAACCTGGGGATTGCATTACCCTACTAGTAGTTGTTCCTTCACAAAGTTCAGGAAGAAGATTATGGGGTTTTCCGAGATTTGCTGGTGACTGTGCCAGTGGCCACAAGAAGGCTGCTTCAGGAACAACCTCAGAGCAGAAGTGTGATATTATCACCGATTCTTGCTCCCAGATGATCGTTCAGCTTCATGACGTCTATGACCCACATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCGGTTCCTGCAGAGGCCAAGAAAACCCATGTCAGTTGGGTCGTATTAGACAAACATCTCAAAAATGAAGAAAAACGGTGCATGGAAGAGCTGCAATGCAATATTGTGGTTATGAAGCATTCCCAACCAAAAGTACTCCGCTTGAATTTGGTTGGCTCGCGCAAAAAGAATCCTGAAGAAGCAGGCCAAGTACTTTCTGGGAAAGATGAGATGCATGGAAAGCAAACCAAAAAGAAGAATGATCGTTTGAATTTCATTAAAGGACCAGTTGTGACTCCAACTAGCAGCCCAGAGTTGGGGACACCATTTACGGCAACTGAAGCAGGTACTTCATCAGTTTCAAGCTCCGACTTAGGAACATCACCACATGTCATCCCAGAGACAAATGGTGAGTTGAAGAAAGATGAAACAATCAAGGAAAAGCAAGAACTCGATGATACTAATTCAGACACAGAGAGTGAAAATCTGTCCACATCCTCAGCAAGTCTGAGATTCCGGCCATGGATCACAGAATTACTTCGACATCAACAATCATCTCAGCGCACAGAAGGAAGACCAGATAGACACTATGATAAGCCTCATACATCTACAGCCAGAGCTTTGCTAGAAAAGTTCTCGAAGCTTGATAGAGAAGCTGGAATTGATATCTCAGCCAGATGGACAACTGAGTTGGATTTCAGTGGAAATGTGAGAGAAACAATAGCATTAACCAGAAATGCCCCTCCTGGACCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAGCCTCCAAAGTGGTTTAGCTATGATGAGTTGGAGCTTGCAACCGGCGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTACATAGAGGGATTCTTCCAGATGGACAAGTCATTGCCGTCAAGCAACATAAATTGGCCAGTTCTCAGGGTGATCTCGAATTTTGCTCGGAGGTTGAAGTCCTGAGCTGTGCTCAGCATCGAAATGTTGTGATGCTAATTGGGTTCTGTATAGAGGATAAGAGAAGGCTGCTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATATGGACGACAGCAAAATCCATTAGAATGGTCAGCAAGACAGAAAATTGCAGTTGGAGCTGCCCGGGGGTTGCGATATCTCCATGAAGAGTGTAGAGTTGGTTGCATTATCCACCGTGATATGCGGCCAAACAACATCCTCATCACCCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGACGGAGAGACAGGTGTTGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGACAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTTGTATTAGTGGAACTTGTTACAGGAAGAAAAGCTGTGGATCTCACTCGACCCAAGGGACAGCAGTGTCTCACTGAGTGGGCACGCCCACTGTTGGAAGAATATGCCATAGAGGAACTGATTGATCCAATGCTGGAAAATCGCTATTCAAGAAATGAGGTCAATTGCATGCTGCATGTTGCATCATTATGCATTCGCCGAGATCCTCATTGTAGACCGCGTATGTCACAGGTTCTCCGAATACTGGAGGGTGACATGGTGATGGAAACAAATTACATTTCACATTCCGGCTACGATGTGGGAAACCGTAGCGGTCGAATCTGGGCAGGGCAGCAGCATTGTAGTGGTCCATTGGTAGAAGAGTCGCTGGAATCGTTCAGTGGGAAGTTGTCACTTGAGAAATACAAGACCTCCTCCCTTTGGAAAAGGGACAAGGTTAGAAGGACTGCACGTGAAGATATGTAA 2244 0.4452 MSREQEKRGKQEKGSDAAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKAASGTTSEQKCDIITDSCSQMIVQLHDVYDPHKINVKIKIVSGSPCGAVPAEAKKTHVSWVVLDKHLKNEEKRCMEELQCNIVVMKHSQPKVLRLNLVGSRKKNPEEAGQVLSGKDEMHGKQTKKKNDRLNFIKGPVVTPTSSPELGTPFTATEAGTSSVSSSDLGTSPHVIPETNGELKKDETIKEKQELDDTNSDTESENLSTSSASLRFRPWITELLRHQQSSQRTEGRPDRHYDKPHTSTARALLEKFSKLDREAGIDISARWTTELDFSGNVRETIALTRNAPPGPPPLCSICQHKAPVFGKPPKWFSYDELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQNPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGETGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPMLENRYSRNEVNCMLHVASLCIRRDPHCRPRMSQVLRILEGDMVMETNYISHSGYDVGNRSGRIWAGQQHCSGPLVEESLESFSGKLSLEKYKTSSLWKRDKVRRTAREDM 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0441 747 Gene3D Transferase(Phosphotransferase) domain 1 481 688 - -
Lele43g0441 747 MobiDBLite consensus disorder prediction 256 276 - -
Lele43g0441 747 Gene3D HUPs 4 178 IPR014729 -
Lele43g0441 747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Lele43g0441 747 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 481 684 - -
Lele43g0441 747 FunFam Dual-specific kinase DSK1-like 12 167 - -
Lele43g0441 747 Coils Coil 262 282 - -
Lele43g0441 747 MobiDBLite consensus disorder prediction 180 288 - -
Lele43g0441 747 MobiDBLite consensus disorder prediction 189 212 - -
Lele43g0441 747 PANTHER OS01G0750732 PROTEIN 296 688 - -
Lele43g0441 747 ProSiteProfiles Protein kinase domain profile. 405 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0441 747 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Lele43g0441 747 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672|GO:0006468
Lele43g0441 747 MobiDBLite consensus disorder prediction 217 251 - -
Lele43g0441 747 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Lele43g0441 747 CDD STKc_IRAK 411 677 - -
Lele43g0441 747 CDD USP_Like 20 147 - -
Lele43g0441 747 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0441 Lele-ChrLele43 3858340 3861881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0441 385 745 Trihelix Transcription Factor Family AT1G70460 46.917 3.89e-100 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele43g0441 PK_Tyr_Ser-Thr 1.1e-41 CL0016