Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0424 ATGCTTCTGGTTTCACCACCTTCCCTTCCTTGGGTAGTTGGAGAAAGTCGAGAGATCTTCCGACTTGAATCTATAAATTCTTCTGAACTGAAAATGGGGTTGCAGCTGATTATTCTTCTCTTTAAGCTGCATTTAGTTTTTAGTGCTCCACAACTTCATGAGCATAGAGGTTCTTTAGATAGTTTTCACTTGTCTTTGAAAGAAGTTTTGTCTGTTGAATTAAAGTCAGAACAACCATCTTCTAGAGTTCCTGCAAGTATTGCAATTACACCTGCAAAATCATTACCTCATGGTTCAGTAGATTCTTCAATATCACGACATCATAAGCATCACCATTCCAGAAGAAAGTTCAGAAACCCAGCCTCTACTTACCATCATGGAGGTCATTCAGTTTTTCCTGCACAGCCTCCTTTTCCTGCTCCAAAGACCAGGAATTTGCCTGCACAATCACGAGGATTTTTATCAGTCCCCTTGAATGCTCCTTCTCCTTCGCCTAGAGTTCTACCCCTTCATTCATCCTCAAAGCATATGAATAATCTATCACCATCAACTGTTTTGTCTTTGCCACCTCCACCTCCTAATGAAGATTGCATGTCAGTGACCTGTTCAGAGCCTCTTACATATACGCCTTCTGGATCACCTTGTGGTTGTGTTTGGCCACTACAAGTTAAGCTCGACCTTGGCATTGCAATATACAAGTTTTTCCCTCTGGTTTCAAAGCTAGCTGAAGACATTGCAGCCAGTGCTTCGCTTAATCGGAACCAAGTTCGCATTGTGGGAGCTGATGCAGCTAATCACCAATTAGAGAAAACCAATGTTCTTATAAACCTTGTACCTGAAGGAGTAAATTTCGATGATGCAACAGCATTTTCAATATATAAGAAATTCTGGCACAAGGAGATTCTCACAGACGCTTCCCTCTTTGGATCCTATGAAGTGCTCTATGTCCATTATGCAGGTTGTCTTCCGCCATCTCCACCTTCTTCTCCTTCAAGCGTCTCTGGTCTGGATGATGTGCCATACCCTGGCTATGACTACAATGGAACAATAATGAAACCTTTAGGAGTAGATGTACCAGTGAATGAAAAGCATGGGACTAGTGAAAGAGGAAGCATGATTATAATAATTGTGTTGTCATGTATAACTCTATCTGTTCTATTCATTGGAGCTGCCTGGCTTTATCTGTTGAAATGTGGTTCTTGTGTTCAACACCCTGAACATTTCCCAGATGATTCAATCCTATCATCTTCAAAACCATCAGGGGCTATTAAGTCATTGACTTATGGGAGCATACCGGGTTCTAGATTAATGTCATTCAGCTCTGGAACAATAATATATACAGGATCTGTTAGGACCTTCACTTTCAATGAAATGGAGAAAGCAACAAACAACTTTGATGCTCCTAGAATAATAGGAGAAGGAGGCTTTGGGCTTGTCTATAAAGGTGTTCTACATGATGGAAGGGAAGTGGCTGTGAAGATTCTGAAAAGCTACCTGGCTCCTGAATATGCAATGACTGGCCATCTTCTTGTGAAAAGTGATGTGTACAGCTATGGAGTTGTACTCGTTGAACTCCTAACAGGAAGAAAGCCTGTGGATTTGTCACAGCCACCAGGTCAAGAAAACCTGGTGGCTTGGGTTCGTCCGCTTCTCACGAGCAACGAGTGTTTACAGACAATCATAGACCCGGTTTTAGAGAGCACCGTGTCTTTTGAAACCGTGGTAAAAGTTGCAGCTATCGCATCGATGTGTGTGCAGCCAGAAGTCTCTCAACGCCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGTTGGTTTGCTGTGAGTATGATGATACAAGCATTATGAGATCAAGAAGCTTCCATGAAGAGAGTCTTCTAATCGATGGAGATGGGAAATTTTCGGGTGAGATGATGGGTTTTCAGGCATTAACAGAATCAAAGTTGCTCAGTCCAATATCAGGCCAGAGATTTGAGTCCTTCAGAAGGCATTCTGCTTCAGAGCCTCTTACTACTGAGAAAAATAGGAAGGAATGGCAGAAATTGCGAAGTTCGTCAGGAGGGAGCATTAGTGAACATGGATTTTCAAACTTCCCCACAAGTTGA 2103 0.4227 MLLVSPPSLPWVVGESREIFRLESINSSELKMGLQLIILLFKLHLVFSAPQLHEHRGSLDSFHLSLKEVLSVELKSEQPSSRVPASIAITPAKSLPHGSVDSSISRHHKHHHSRRKFRNPASTYHHGGHSVFPAQPPFPAPKTRNLPAQSRGFLSVPLNAPSPSPRVLPLHSSSKHMNNLSPSTVLSLPPPPPNEDCMSVTCSEPLTYTPSGSPCGCVWPLQVKLDLGIAIYKFFPLVSKLAEDIAASASLNRNQVRIVGADAANHQLEKTNVLINLVPEGVNFDDATAFSIYKKFWHKEILTDASLFGSYEVLYVHYAGCLPPSPPSSPSSVSGLDDVPYPGYDYNGTIMKPLGVDVPVNEKHGTSERGSMIIIIVLSCITLSVLFIGAAWLYLLKCGSCVQHPEHFPDDSILSSSKPSGAIKSLTYGSIPGSRLMSFSSGTIIYTGSVRTFTFNEMEKATNNFDAPRIIGEGGFGLVYKGVLHDGREVAVKILKSYLAPEYAMTGHLLVKSDVYSYGVVLVELLTGRKPVDLSQPPGQENLVAWVRPLLTSNECLQTIIDPVLESTVSFETVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCCEYDDTSIMRSRSFHEESLLIDGDGKFSGEMMGFQALTESKLLSPISGQRFESFRRHSASEPLTTEKNRKEWQKLRSSSGGSISEHGFSNFPTS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0424 700 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Lele43g0424 700 Gene3D Phosphorylase Kinase; domain 1 443 500 - -
Lele43g0424 700 SUPERFAMILY Protein kinase-like (PK-like) 444 496 IPR011009 -
Lele43g0424 700 MobiDBLite consensus disorder prediction 681 700 - -
Lele43g0424 700 PANTHER OS01G0750732 PROTEIN 189 496 - -
Lele43g0424 700 Gene3D Transferase(Phosphotransferase) domain 1 501 625 - -
Lele43g0424 700 Pfam Protein tyrosine and serine/threonine kinase 498 602 IPR001245 GO:0004672|GO:0006468
Lele43g0424 700 SUPERFAMILY Protein kinase-like (PK-like) 498 602 IPR011009 -
Lele43g0424 700 MobiDBLite consensus disorder prediction 662 700 - -
Lele43g0424 700 MobiDBLite consensus disorder prediction 662 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0424 Lele-ChrLele43 3736594 3740295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0424 419 693 Receptor kinase-like Gene Family AT5G56890 43.564 6.05e-61 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele43g0424 PK_Tyr_Ser-Thr 1.7e-07 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0277 38 2201820 2203780 Lele43g0424 43 3736594 3740295 CCT
Lele39g1131 39 19806236 19810826 Lele43g0424 43 3736594 3740295 CCT
Lele40g0263 40 2096905 2103857 Lele43g0424 43 3736594 3740295 CCT
Lele41g0972 41 19186723 19190421 Lele43g0424 43 3736594 3740295 hybridization
Lele42g0941 42 22128535 22132420 Lele43g0424 43 3736594 3740295 hybridization