Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0417 ATGGCGGATGTTTCGCTTATTTGGGATTTAGTGAAAGATGCTTTGGCTATTGTTGGAAAAGGTTTAGAATACAAGAGCACTCGCAAGAATCTGAAGTCAGCCGTCGAGGATTTGAGTCCAATGGTTGAAAAGATCGAACAAGCCATGAATCAGATGGATCTCCCAACTGATCATATACAGAAACTGAAGGAGCAATTAGCAGAAAACAAGGAGGCTCTTGGAAAAACCAAAATCCATTGGTGGAGTTGTGTTCTTGCCCCTTATGCTCAGACCAAAATATCTGAAGGGTTGACTTCGCTAGAAAGGATAATCTCTGTTCAGATACAAATTCTCATGCTTCAGCATTTGACTGATATTCTCTCCATGCTCAGTTCTCAAGGTCACCATAGCCTTGGAAGCTCAATCAATGGTGGGACACAGATATTGAAGGATCATTTTGATGATAGATGCTCCCAATTTACAGTGGGGCTTGATGATGATTCCATCAAAGAGTTGAAGCTTAAGCTGCTTCATGGTGATGAGCAAGTTCTGAACTTGTATGGTTTACCAGGATCGGGGAAGACTACCATGGCTAAACAACTCTGTCTTGATCTCCAAGTAAAAGGTAAATTCAAGTCCAATGTCATATTTGAGACGCTGGGTTCACAGATTCAAGGCAAAGAGGTAATCAACAAGTTGCAGGATCAACTGTCTAAGTACGGTGAAAATCCAGTGCTGTTGGTATTGGATGATGTTTGGCCTCACTCAGAAAATATCGTTCACAAATTACAACTAAGATCCCCAAAAACTAGAATTTTGGTGACTTCAAGAGCTCAAATCAGAACAGTGAGAACCAGATTCCCTATGAATCTTCTCTGTGAGGAAGATGCAGAAAAACTTCTTCGTCACTTAATTCAACCCAGTGACATCGATTTTAATGAGCCAGCAAGACGTAAAATTCTCCTCCAGATAGTTACAGGTTGTAAGGGCTTACCATTGGCTCTTGAATTCATTGGGGGAAAACTGAAAGGGAAGGATATTGAAGCGTTTCAAAAGGTGAAATTAGAATGGTCACAAGGTGTTTCTATTATTGCTTCAAATACAGAGCTGCTTGACCATCTCCAAAATACATTGAGTCTTTTGGTAGATGAATCCATCATGGAGTGTTTTATGGACCTTGGGTTGTTTCCTGGTGTTCATAAAGTCCCCATTACTGCGCTCATAGACATGTGGATTGAACTGTATGAACTCAATGAGCCAAGAAGAAGCCTAGATGCAATCATCTTCATCAAAGAATTAGTAGCCATGAATTTGGCCGCTGGCATCAAAATTAGAAGGATAGTTGGAATGGACGTGGACAATTACTACAATAACCACTTCCTCTTGCAGCATGGTCTTTACAGAGACCTAGCCATCCATATGAGCCAACAAGGACCATTGGAGAATAGAAAGAGATTGATCATTGATATTAATCAATGGCGGCCCCAGCAACAACAACGATTTGCTGCTTCTATCCTCTCAATATCAGCAGAACAAAACATCACTCCTGATTGGTGCAACATTCAAGCACCTGGTGCTGTGGTCCTGGTCTTGAATTTAAACACTGCAGAATACACTTTACCTGAATTCATTAAGGAAATGGGAAGCCTGAAAGTTCTTATAGTCACCAGTTATGGTTTCTGCCGCACTGACATAAGAAACTTGGAGCTACTTGGTTCCTTAATGAGCCTTAAAAGAATCAGATTACAGCAAGTTTCAATTCCATGCCTGTGTGATCTGAAGAATGTGACCAAGCTATCACTTTACATGTGTCACGTGAAGAATGCTTTTGAGAGCAGTTCCATTGAATTCTCAGAAGCAATGCCAAAACTTGAAGAATTGAGCATTGAGTATTGCGAAGATTTGGAGAAGTTGCCAACTGGGCTCTGCGATATCATCACCATGAAGAACCTCACAGTAAGTAACTGTCACAAGTTTATTGAACTACCTGAAGAAATTGGGAAGCTTGGGAATTTGGAATTACTGAGAATCAGTTACTGTGCTACGATTGAAGAAATGCCGAAGTCAATCACAAAGCTAAAAAGTCTAAACTTTCTGGACATATCATTCTGTGTAAGCCTTAAGAAATTTCCAGAAGAAATTGGTGAGCTGCAGAATCTAACAAAGCTTTATATGACGGGTTGCCCAGTACGTGAATTGCCAGACTCAATGGATTTTCAGAAGTTAGAGAGTGTCATATGCGATGAGTATACATATCCCTTGTGGGAAATTATCAAACTGATGCGATTTTCTGGGCTGAACATAAAGATGGCCACCATGGATATTAGCTTGAATTGGCTTGACTGA 2325 0.4052 MADVSLIWDLVKDALAIVGKGLEYKSTRKNLKSAVEDLSPMVEKIEQAMNQMDLPTDHIQKLKEQLAENKEALGKTKIHWWSCVLAPYAQTKISEGLTSLERIISVQIQILMLQHLTDILSMLSSQGHHSLGSSINGGTQILKDHFDDRCSQFTVGLDDDSIKELKLKLLHGDEQVLNLYGLPGSGKTTMAKQLCLDLQVKGKFKSNVIFETLGSQIQGKEVINKLQDQLSKYGENPVLLVLDDVWPHSENIVHKLQLRSPKTRILVTSRAQIRTVRTRFPMNLLCEEDAEKLLRHLIQPSDIDFNEPARRKILLQIVTGCKGLPLALEFIGGKLKGKDIEAFQKVKLEWSQGVSIIASNTELLDHLQNTLSLLVDESIMECFMDLGLFPGVHKVPITALIDMWIELYELNEPRRSLDAIIFIKELVAMNLAAGIKIRRIVGMDVDNYYNNHFLLQHGLYRDLAIHMSQQGPLENRKRLIIDINQWRPQQQQRFAASILSISAEQNITPDWCNIQAPGAVVLVLNLNTAEYTLPEFIKEMGSLKVLIVTSYGFCRTDIRNLELLGSLMSLKRIRLQQVSIPCLCDLKNVTKLSLYMCHVKNAFESSSIEFSEAMPKLEELSIEYCEDLEKLPTGLCDIITMKNLTVSNCHKFIELPEEIGKLGNLELLRISYCATIEEMPKSITKLKSLNFLDISFCVSLKKFPEEIGELQNLTKLYMTGCPVRELPDSMDFQKLESVICDEYTYPLWEIIKLMRFSGLNIKMATMDISLNWLD 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0417 774 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 12 773 IPR039203 GO:0050832
Lele43g0417 774 SUPERFAMILY RNI-like 517 748 - -
Lele43g0417 774 Pfam NB-ARC domain 160 232 IPR002182 GO:0043531
Lele43g0417 774 Pfam NB-ARC domain 238 375 IPR002182 GO:0043531
Lele43g0417 774 Gene3D Ribonuclease Inhibitor 478 748 IPR032675 -
Lele43g0417 774 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 19 126 IPR008808 -
Lele43g0417 774 Gene3D - 139 279 IPR027417 -
Lele43g0417 774 PRINTS Disease resistance protein signature 321 335 - -
Lele43g0417 774 PRINTS Disease resistance protein signature 176 191 - -
Lele43g0417 774 PRINTS Disease resistance protein signature 684 700 - -
Lele43g0417 774 Gene3D - 285 372 IPR042197 -
Lele43g0417 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 360 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0417 Lele-ChrLele43 3696657 3699680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0417 553 732 WRKY Transcription Factor Family AT4G12020 27.451 3.94e-09 58.5