Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0410 ATGGCTTCATCTTCTTCCACTAATCCATCATCTCTATCTCCAAAGAAATATGATGTTTTTATTAGTTTTAGAGGTGAGGACACCCGCTTCAATTTCATCAGCCATCTTCATGATGCTCTTTGCAGAAAGAAAATAGAGACATTCATCGACTACAGAATTGAGAAAGGAGATGAGCTATGGCCATCTCTTGAGAAAGCCATCCATGATTCAACTCTCTTCCTTGTTATCTTCTCAGAAAGCTATGCATCTTCTACATGGTGCTTGAAGGAGCTTTCAAAAATATTAGAGTGCTCAAAAGATGAAGGTCACCAGCTTGTAATGCCAGTGTTCTATAGAGTAGATCCCTCAGCTGTGACGAATCAGTGTGGGAGTTACCAGAAAGCATTTGAAGAACATGAGCTCAAAAGCATCAACAACCAACAACTGCAAAAGTGGAGGGACGCTCTCACTAATGCTGCCAATCTATCTGGTTGGCATTGTAGCTTTGACAGGGATGAAGCAAAGCTAATTAAGGAAATAGTGAAACATGTTATACAAAAGTTGAGCCGTCATTATCGAAGAACAGCCATCAATGGTGAGTTGTGCTCATCAAGTGGACATCTCAGCATAATTGATACATTGTTTCTAAACGGATGCCAAAGTGTGACAAATCTTCACAAATTGGTTGAGCTGCGTCACCTCCGACATCTTTATGCCGATCGGTGTAATAAGCTAGCATCAAATCTACATTCCATATTTGATGAGATGCGTGATTTAGAAGTTCTATGTATGAATGATTGTAATGAATTATTGGAAGTGCCTGACAACATCAGCTCGTTGTCATCATTACGTGTGTTAAAGTTCTCAAGGAGTAATATAGAGAAGTTGCCTTTAAGCATCAAACATCTTTCGAGCCTGCAACTTCTTCACTTAAATAAATGCGAAAGGCTTCGGTGCATACCAGAACTACCTTCCTCCGTCTTTGCATTCTCCATCGAGGACTGCATATCCATTGAGATCCTACATTTACCTTTAACTACCAGTGGAGATAGACTAGGAAAAGAAAAAAGGATGGAGGTCCCAAATGACAAAGATTGTTACTTTAGATTCAGGAATTGTGTGAAGTTGGATCGAATTCTAATCAAAGCTGCTGAGGCAAAGGTGGTGCTTGAGATAAATAAAGCCATTCATAAAATGGCTAGAATGGACTATCCAGGAGAAAGAGTTCCAGAGTGGTTCATGTATAGGTCTACAGAGTGTTTCGTAACAGTAGATCTTAGTTCGATTCCACAACCTTGGGATGCTAGTTTCATTTTCTGCGCCATTTCTCAATCACCAGGGTGGATAGACATTGGTGCCAAATGCTTTATTGATGGTGAATATGCTTGCACGTCTCAAGGGATATGGACTCCCTTATGTCCCCTGTTGTCAGATCATGTTTTGCTTTGGTACGATTCAAAGTCATGTGGAGAACTAGAAAGGAAAATAGAAGAAAAGAAGAGAGATTCTCAAAGCAACACTTATCATCCATTGCTTCAAGTTCAATTCACAGTGGGCTGCCTTGAGTCTTTGGATTCTGGAAGAAGAGGAGAGATCAAAGAGTGTGGGAAATATATGGAGCTTGAGGCTGAGGAAGGCATTGAAGGAGCTTGCAAATATAAGATCAAGTTCATCTATCTACACATGCATGTGAAGAAGCATTGGATCGACAATCAATCAAAGCTGTTGAAGCAAAAGCACTACTTAAGAATTCCAGAGTGGTTCAGATATAAGACTAGACAGTCTTCCCTAACTGTGGATCTCAGTTCTATTCCTCGACCTTGGGATGGCCGTTTCATTTTCTGCTCCGTCATTTCTAAATTACCAGCGACGACCACATGCATTGATGCCAGATTCATTATTGATGGTCAATTTGCTGATCTCACTTGCGTGTATATCACACGTACGTCCACGTTGTCAGATCATGTTTTTCTTTGGTATGACGATCCAGATTCTTTTGAAGGACTTGAAGGCGAAATTGTGAAATGGAAAAGAGATGCTCAAGGCAACACTTATCATCCATTGCTTCAAATTGAATTCGATGTGAACAGTGCCAAGTCTTGGGACGATGGAAGAATAGAAGAGATCAAAGAATGTCCGTTGGTGTCTCATTCTGGAAGATGGCATTGGCACCTTCTAAGAGTGACGTTATTAATTAATTCTGAAGCAACGCCTCCTCGTCATATGGGGAATAGATATTTGTCTTATAACAGAGACAATGATGGTGAAGAACATGAAACCAGTGAAAGCCAAGAAGATTCTGACTCACCTGATTCTCTTAAAGCACTCGAAGGTCTGAAGAAGTTGGGACATGGAGTGTTAGGAAAAGTCAACGTACCATTTGCTCATTCTCGGATGAATCATACTCAAGATTCCTCTCTGGGCGTGATTGAAGGAGAGGTCCTTTTCTCTTTAGATTGTCTTTTCGACCCGTTTATAGCAGCAACTACACGTACAAGTTCCCATTACGTAACCTATTTCGTGTTTATTACTTGCACCATCCTCGACGCTCGATTGACTCGAAAGAAAATAGAGACATACATCGACTACAGAATTGAGAAAGGAAATGAGGGAAGTGAAGCCACTGAAGGCATAATTCTGAACCTTTCAGAAGTTGAAGAGATGCACTTAAGTAGGGAAGCTTTTCGTTCAATGCCCAATCTACAGCTTCTTTATTGTTATAGAAACTTCGATGATCAATTCAGGAACGAGTTCAAATTCCCTTGTGGCATAGAGTTCTTACCAAAAAATCTCAGACTATTGCATTGGGAGGGATACCCTTTAAAGTCCTTACCAACAACATTCCAGGTTGAAAATCTTGTTCAAATTATAATGCCAGATAGCAATTTGACAAAACTTTGGGATGGGGTCCAGAATCTTGCGAATTTGAGAAAAATTGAACTGTTTGGATCAGAAAAGTTGATGGAGCTCCCAAATTTTTCCAAGGCGATACATCTTGCAGAAGTTGATCTCAGGTGTTGCTCAAGATTGCGTAGTGTTGATCCATCTATCTTATCTCTTCACAGCCTTCGTCGTTTATTGCTCAGATATTGCAAAGCCCTTACCAGCCTTACAAGCAATACCCATCTCAAATCACTGGAGTATCTAGACCTGTGTGAATGCTCAAGACTGAACAAATTTTCAGTGACCTCAGAAAATTGTGGGTTTCAATTGGAGCTTAGAGGAACAGCCATCAATGGTGAGTTGAGCTCATCAAGTGGATGTCTCAGCAAAATTGATGCATTATTTCTAGACTCATGCAAAAGTGTGACCAGTCTTCACAAATTGGTTGACCTGCGTAACCTCCGACTTCTTTATGCTCGTCGTTGTAATAAGCTAGTATCAAATCTACGTTCCATATTTGATGAGATGCGTACTTTGGAAAAACTAAATCTGAATTATTGTAGGGAATTATTTGAAGTGCCTGACAACATCAGCTTGTTGTCATCATTGCGCGAGTTAAATCTCTCAGGGACTAATATAGAGACCTTGCCTTCAAGCATCAAACACCTTTCGAGCCTGCAATGTCTTGACTTGTGCGGATGCAAGAGGCTTCGGTCTCTGCCAGAACTCCCTCCCTCTGTCTTGGGGCTAACCATCAGCAACTGCATATCCATTGAGATCCTACATTTACCTTTAGGAAAAGGAAAATGGTTGGAGATCCCAAATGGCCCATATTGTGACTTTAGTTTCGCAAATTGTGTGAAGTTGGATCGACCATCAATCAAAGCTGCTGAGGCAAAAGTGCTACTTGACATAAATAAAGCCATTTGTGAAGATGCTAGCATCATATATCCAGGAGAAGGAGTTCCAGAGTGGTTCATGTATAGGCCTACACGCTCGTCTTTCTTAACCGTGGATCTCAGTTCAATTCCACAGCCTTGGGATGGCAGTTTCATTTTCTGCGCCGTCATTTCTCATTCGCCAGGGTTGAGAGAAATTGCTGCCGAATGCTTTATTGATGGTCAATATGCTTGCAAGTCTCATCTATGCTGTCCTCTCGATCATTCCCTGCTGTCAGATCACGTGTTTCTTTGGTACGATGCGAAGTCATGTGGAGAACTACAAAGGAAAATTGAGGAAACGAAAAGAGATGCTCAAAGCTACACTTATCATCCATTGCTTCAGATCGAATTCACAGTGGATTGTCTCGAGTCTTCGGATAATGGAAGAAGAGAAGAGATCAAAGAGTGTGGGGTGTGCCCGACATCCACACTTGAATATCAAAATCACATTCAACAAATTCAATTGGCATTGCAGCCACATCCTAACTCTATTGCAATGGAAGCCATCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 4347 0.4104 MASSSSTNPSSLSPKKYDVFISFRGEDTRFNFISHLHDALCRKKIETFIDYRIEKGDELWPSLEKAIHDSTLFLVIFSESYASSTWCLKELSKILECSKDEGHQLVMPVFYRVDPSAVTNQCGSYQKAFEEHELKSINNQQLQKWRDALTNAANLSGWHCSFDRDEAKLIKEIVKHVIQKLSRHYRRTAINGELCSSSGHLSIIDTLFLNGCQSVTNLHKLVELRHLRHLYADRCNKLASNLHSIFDEMRDLEVLCMNDCNELLEVPDNISSLSSLRVLKFSRSNIEKLPLSIKHLSSLQLLHLNKCERLRCIPELPSSVFAFSIEDCISIEILHLPLTTSGDRLGKEKRMEVPNDKDCYFRFRNCVKLDRILIKAAEAKVVLEINKAIHKMARMDYPGERVPEWFMYRSTECFVTVDLSSIPQPWDASFIFCAISQSPGWIDIGAKCFIDGEYACTSQGIWTPLCPLLSDHVLLWYDSKSCGELERKIEEKKRDSQSNTYHPLLQVQFTVGCLESLDSGRRGEIKECGKYMELEAEEGIEGACKYKIKFIYLHMHVKKHWIDNQSKLLKQKHYLRIPEWFRYKTRQSSLTVDLSSIPRPWDGRFIFCSVISKLPATTTCIDARFIIDGQFADLTCVYITRTSTLSDHVFLWYDDPDSFEGLEGEIVKWKRDAQGNTYHPLLQIEFDVNSAKSWDDGRIEEIKECPLVSHSGRWHWHLLRVTLLINSEATPPRHMGNRYLSYNRDNDGEEHETSESQEDSDSPDSLKALEGLKKLGHGVLGKVNVPFAHSRMNHTQDSSLGVIEGEVLFSLDCLFDPFIAATTRTSSHYVTYFVFITCTILDARLTRKKIETYIDYRIEKGNEGSEATEGIILNLSEVEEMHLSREAFRSMPNLQLLYCYRNFDDQFRNEFKFPCGIEFLPKNLRLLHWEGYPLKSLPTTFQVENLVQIIMPDSNLTKLWDGVQNLANLRKIELFGSEKLMELPNFSKAIHLAEVDLRCCSRLRSVDPSILSLHSLRRLLLRYCKALTSLTSNTHLKSLEYLDLCECSRLNKFSVTSENCGFQLELRGTAINGELSSSSGCLSKIDALFLDSCKSVTSLHKLVDLRNLRLLYARRCNKLVSNLRSIFDEMRTLEKLNLNYCRELFEVPDNISLLSSLRELNLSGTNIETLPSSIKHLSSLQCLDLCGCKRLRSLPELPPSVLGLTISNCISIEILHLPLGKGKWLEIPNGPYCDFSFANCVKLDRPSIKAAEAKVLLDINKAICEDASIIYPGEGVPEWFMYRPTRSSFLTVDLSSIPQPWDGSFIFCAVISHSPGLREIAAECFIDGQYACKSHLCCPLDHSLLSDHVFLWYDAKSCGELQRKIEETKRDAQSYTYHPLLQIEFTVDCLESSDNGRREEIKECGVCPTSTLEYQNHIQQIQLALQPHPNSIAMEAISRKRKYHSLLR 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0410 1448 Gene3D Ribonuclease Inhibitor 189 388 IPR032675 -
Lele43g0410 1448 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Lele43g0410 1448 Gene3D - 14 188 IPR035897 -
Lele43g0410 1448 ProSiteProfiles Leucine-rich repeat profile. 1156 1177 IPR001611 GO:0005515
Lele43g0410 1448 Pfam Leucine rich repeat 1131 1188 IPR001611 GO:0005515
Lele43g0410 1448 Pfam Leucine Rich Repeat 945 964 IPR011713 -
Lele43g0410 1448 Pfam C-JID domain 1271 1407 IPR045344 -
Lele43g0410 1448 MobiDBLite consensus disorder prediction 735 765 - -
Lele43g0410 1448 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Lele43g0410 1448 Gene3D Ribonuclease Inhibitor 1062 1236 IPR032675 -
Lele43g0410 1448 Gene3D Ribonuclease Inhibitor 856 1061 IPR032675 -
Lele43g0410 1448 SUPERFAMILY L domain-like 186 902 - -
Lele43g0410 1448 SUPERFAMILY L domain-like 880 1221 - -
Lele43g0410 1448 SMART till_3 16 155 IPR000157 GO:0007165
Lele43g0410 1448 Pfam TIR domain 16 183 IPR000157 GO:0007165
Lele43g0410 1448 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Lele43g0410 1448 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1085 1211 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0410 Lele-ChrLele43 3625027 3642044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0410 9 181 WRKY Transcription Factor Family AT4G12020 28.736 3.93e-10 63.2