Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0408 ATGCTCCACCGATTGTCGTTTTGCCAGAGGGAGATACGACTTGCCATTTCATCTTCGCCGAAAGCCAAAGCATCAAAACGATTAGGGCAATTTGAAATGTGGAATGGCAGAGTTCAGTTTGGTTCAACTGTTAAACTTCATTTCAAGCAGACTGGTTTGCTAGGCTGCTTTTCTATTTTGTTGCCAATTGGTTCTGACATGTGGATTTACTGTGGTTCGTTGTCCTTGTGCTCGGTTCTAGTCATGGACCTGGAGAGAGAGAGAATTAAAAGTGGATGTCAGAAGATTCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTACACTCATTGGTGATGATGAGAGAAATAGCCCGTGGGGTTGTTGATGACAGAGATAGAAAGGTGACAAAGAATGACGTGATTAGTGCTCTGCGCAACAGTATCGAGAAAATGGTGTGCGCATCCAGAGATATTATTGAAGTAATAAGCAGGATGTCGTTTGAAGGCTTAGATGACCAAAGAATGCATTTGGTATTGAGGATGAAAGAAATTGCACGTGGGATTGCTGATAAACAAGCAAGAGCTGCATTAACTAGGCATGACATGCTTGCAGAACAAGTTGGAGTTGTTTATGACGGGATAGGATATAGTCCAATGGGCGAGTCAGCAAAGACCAGCAATGGTGATGTCCTGTTAGATGGGGGACAAAGCATAATCAATGAAAATGAGATGTTCGAGGTAGAACATGTTTTAGGATTTGAAAATGGAATAAATGAAGTACAAGATTCCCTGTTGCCATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCGGATGATTGCATCACTTTAGAGTGGGTTCAAGACATGATGTTCACCCTTGAGCAGGCTTCACAGCAGATGTTGCCATCTGAGTTCTGCCACGTCATACCATCAATGTTGGTAGATAAATTGACAGATTCTGCTCGCAGTATACTATGCGAAGAACCAAACTGTGTGGAGATCAATTGTCAAGGAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATCTACTGTTTCTCTTTAAGCATATTGGCATGCCTTCTGAGAGCCAGATCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGTATGGAGGTTTTTTTGGTCTTGCTGGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACCGCAAGATATGGTTTTAAGAAGGAGGTGCGGACGAAATATGGTGGCCAAGGTGAAGATGTATATAATAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTACTCATGGAGGGCTTTTTCGTAGCATAAAAGCTGCTCCTTCTCGAAAGCCAAAGCGAAAGAAGACGCAAAGAGTGGATCTTGGATCTTTAACTGAGTTATCTGAAGTTAAAAGATCTTCTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGCGATATTCTTTGGTCAAAACCATCTAATAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTAGGTCTATCGTGGGGTCCGGATTGCACTGAGACTTTCTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGACCCGATGCAAGGGTTGGTCAGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGAGAATTAGGAAAATTGTATACACTTTTCAGTGCTCCTGACTACCCTCAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATATTGAAATCGCCTGATTTTCAGAGTCCTAGCTTTCACTCATTTAAATCGGCAGATAGACCAAAGGTGGATCCTTGTATTGATTGTGATGCTGATGAAATGGACTTTAGCAAACTAGACTCTCCGCAAATGGCCTCAACCTCTGGTATTTCAGCTTCCCAAAGATCTTATCCAGCAGGGGTGACACCGGAGTTTGACTTTGCGGCATTGGGCATTTATAATGCCCCATCTTGGAGTGTTCAGCTACCTGATGGTTCAGGTGGCACCCAAGTTGTGCAGGTTCCAAGGGCTCCTGTGGTGGAAGGACTGCCTCTTCCTCAAAACATACAGGAACCTCACAAGGCCGCTTATGAGTACTTGTTTGAGCTCGTTGCTTCCTTAAAACTTATGCTTATGACAAGGGAGACTGACAACAGGTCAAGTCAGTCAGGTTTGCGAAGTAGAGCTAGGAAACAAAAAAGAGGAAGCAATAACTAA 2310 0.4242 MLHRLSFCQREIRLAISSSPKAKASKRLGQFEMWNGRVQFGSTVKLHFKQTGLLGCFSILLPIGSDMWIYCGSLSLCSVLVMDLERERIKSGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVISALRNSIEKMVCASRDIIEVISRMSFEGLDDQRMHLVLRMKEIARGIADKQARAALTRHDMLAEQVGVVYDGIGYSPMGESAKTSNGDVLLDGGQSIINENEMFEVEHVLGFENGINEVQDSLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQQMLPSEFCHVIPSMLVDKLTDSARSILCEEPNCVEINCQGEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQIYVFNGNYVDKGAWGMEVFLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVRTKYGGQGEDVYNKCLECFKELPLASVIGGCVYTTHGGLFRSIKAAPSRKPKRKKTQRVDLGSLTELSEVKRSSVDCPYEGPNILLSDILWSKPSNKDGLRDNTGRKLGLSWGPDCTETFLKQNKLKLIIRSHEGPDARVGQDDFGDMLCGYSLDHDGELGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFQSPSFHSFKSADRPKVDPCIDCDADEMDFSKLDSPQMASTSGISASQRSYPAGVTPEFDFAALGIYNAPSWSVQLPDGSGGTQVVQVPRAPVVEGLPLPQNIQEPHKAAYEYLFELVASLKLMLMTRETDNRSSQSGLRSRARKQKRGSNN 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0408 769 Pfam Calcineurin-like phosphoesterase 341 560 IPR004843 GO:0016787
Lele43g0408 769 ProSitePatterns Serine/threonine specific protein phosphatases signature. 405 410 IPR006186 GO:0016787
Lele43g0408 769 Gene3D - 277 659 IPR029052 -
Lele43g0408 769 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 114 755 - -
Lele43g0408 769 MobiDBLite consensus disorder prediction 746 769 - -
Lele43g0408 769 SUPERFAMILY Metallo-dependent phosphatases 298 635 IPR029052 -
Lele43g0408 769 PRINTS Serine/threonine phosphatase family signature 404 428 IPR006186 GO:0016787
Lele43g0408 769 PRINTS Serine/threonine phosphatase family signature 586 602 IPR006186 GO:0016787
Lele43g0408 769 PRINTS Serine/threonine phosphatase family signature 341 368 IPR006186 GO:0016787
Lele43g0408 769 PRINTS Serine/threonine phosphatase family signature 371 398 IPR006186 GO:0016787
Lele43g0408 769 PRINTS Serine/threonine phosphatase family signature 441 467 IPR006186 GO:0016787
Lele43g0408 769 SMART pp2a_7 308 630 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0408 Lele-ChrLele43 3612627 3617120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0408 272 552 Calmodulin-binding Proteins AT5G63870 52.921 4.57e-100 309