Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0405 ATGGGGCATCATTCTTGCTGCAACAAGCAGAAGGTGAAAAGAGGGTTATGGTCACCTGAAGAAGATGAAAAGCTCATCCACTACATCACCACTTATGGCCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCTGGAAGCTTTTCTTCTCAAGAAGCAGCACTCATTATAGAGCTCCATAGCATTCTAGGCAACAGGTGGGCTCAGATTGCCAAGCACCTACCTGGAAGAACTGACAATGAGGTCAAGAACTTCTGGAACTCAAGCATCAAGAAGAAGCTGCTTTCTCATCATGATCATCTTCTTCCTCCTTCCTTTTCCACTTTTTCTGATCATCTTCTTCATCTTCATCATAATGCTCCTGTTGAAGCCTTCTTCCCTTCAAACCCTAATAATCTCCTCCTTAACTACTCTCTTCATCTTCATCCTGATCAGCTATACCTTCCCAGTACTACTCCATCCCCAATAATCCCGCAAGCTCTCAACAATGGCCTCCATCATAAATCTGATCAAGTTAAAGTAGAAGACATAGCCAATTATAACCCCAATAATAGCAACAATTTCCTTCATGTCCACCAGAATCCTATCTCATCAGAAAGCACACCACCACCTAATATTATTATTCCATCTTCATGTGAATATGTCAATAACAACAACAATAATAATGATACATTGTCATCAATATTGGGTCTGATCAGTAATCCGAATCAAGACGATAATCATACCAAAAGTGATCATGTTCTTCATCATCTTGTTTCAGAGAAATTCATGAACCCAGCAGGTTCGATGTTAATGCAGCATTATGATATTCCCGATGATGGCAACTTGGTGATGCCCAAAATCTGGAATAGCTTTGAGGATTATGTGTTGAGCAGTAGTGATACAGTGCCATCATCATCTTCTTATTCACAAGACTTGTTATTACAGGACTCTTTTGCCAGAATCCAGTGTTACACACCATCATCTGTTTTTTGTCCACAAGAAGATCATCAAACTTTCTCCGCCAATCAAATGGAGTACATTGATGCAATCCTATCATCGTTGCCCTCCTCAACCACGACGAACCCTATTCTTCCATCTACCTTGGGGCCTTGA 1092 0.4112 MGHHSCCNKQKVKRGLWSPEEDEKLIHYITTYGHGCWSSVPKLAGSFSSQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHHDHLLPPSFSTFSDHLLHLHHNAPVEAFFPSNPNNLLLNYSLHLHPDQLYLPSTTPSPIIPQALNNGLHHKSDQVKVEDIANYNPNNSNNFLHVHQNPISSESTPPPNIIIPSSCEYVNNNNNNNDTLSSILGLISNPNQDDNHTKSDHVLHHLVSEKFMNPAGSMLMQHYDIPDDGNLVMPKIWNSFEDYVLSSSDTVPSSSSYSQDLLLQDSFARIQCYTPSSVFCPQEDHQTFSANQMEYIDAILSSLPSSTTTNPILPSTLGP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0405 363 Gene3D - 11 46 - -
Lele43g0405 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 93 IPR017930 -
Lele43g0405 363 PANTHER MYB DOMAIN PROTEIN 55 1 242 - -
Lele43g0405 363 SMART sant 13 91 IPR001005 -
Lele43g0405 363 CDD SANT 17 86 IPR001005 -
Lele43g0405 363 Pfam Myb-like DNA-binding domain 45 86 IPR001005 -
Lele43g0405 363 SUPERFAMILY Homeodomain-like 11 85 IPR009057 -
Lele43g0405 363 ProSiteProfiles Myb-like domain profile. 9 89 IPR001005 -
Lele43g0405 363 Gene3D - 47 93 - -
Lele43g0405 363 FunFam Myb transcription factor 46 93 - -
Lele43g0405 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 43 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0405 Lele-ChrLele43 3598114 3599802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0405 1 95 MYB Transcription Factor Family AT3G13890 75.424 3.21e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele43g0405 Myb_DNA-binding 3.1e-12 CL0123