Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0398 ATGGCTCGCGGGAGAATAAGGGCAAGGATACGGAGGAGCAATCTTTACACATTTGCTTGCCTTCGACCCAGAACCACTGAGGAGGGGGCCCATTCCCTTGAAGGCCCAGGGTTCTCACGAACTGTTCTCTGCAACCAACCTCATCTCCATGAAAAGAAACCTCTACATTACTGCAAGAATCATATATCAACTACAAAATATAATGTTATCTCATTTTTCCCGAAGGCTCTCTTTGAGCAATTTCGACGAGTTGCTAATATATATTTTCTTTTGGCTGCATGCCTCTCAGTCTCTCCAATTTCACCTTTTACACCAGTGAGTATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCACTGGAAGATTGGCGAAGGTTTCTTCAGGATGTCAAAGTTAATCGTCGGAAGGTTAGTGTCCATAAAGGCGACGGTGTTTTTGATTTGAAGGCATGGCAGAAGATAAGGGTTGGAGATGTCGTAAAAGTAGAAAAGGATCAATTTTTCCCTGCGGACTTGCTTCTGTTGTCATCAAGTTATGATGATGGTATATGCTATGTGGAAACTATGAATTTAGACGGTGAAACGAACTTGAAAGTGAAGAGATCTTTGGAGGTTACCTTGCCTCTTGATAATGATGGCGCTTTTAAGGATTTTACAGGAACAATAAAATGTGAAGACCCAAATCCCAATCTCTATACATTTGTTGGTAACATTGAGTATGAACGTCAGGTTTATCCCATTGATCCTATTCAAATTCTCCTCCGAGATTCAAAGCTGAGAAATACTGATCATGTCTATGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTGATGCAGAATTCCACAAAGTCCCCTTCAAAAAGGAGCAGAATAGAAAAGAAGATGGATTATATCATATATCTTCTTTTCACGGTCCTTATTTTAATATCTATGATAAGTTCCATAGGATTTGCTATAAAAACCAAGTTTCAAACTCCAGACTGGTGGTACTTACAGCCCATGGTAGCTGAGTACCAGTATAATCCCAACAATGCTGCCTTGGCTGGGATGAGCCATCTTATTACTGCGCTCATTCTTTATGGGTATTTGATACCCATATCACTCTATGTGTCAATTGAGCTTGTGAAGGTTCTACAAGCAAGCTTCATCAACAAAGACTTGCAAATGTTCGATGAAGAAACTGGGACTCCAGCTGATGCACGAACTTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTTTCTGACAAGACTGGCACTTTAACCTGCAATCAGATGGGTTTTTTGAAATGCTCCATTGCTGGTACAGCATATGGAGTACGTTCCACTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCGGACTTTGAGGAGCAGGAGTCAGATCTCTCTAATTTTCCCATGCCTAAGAATAAATCACGTGGTTTGAGTGAAAATAATAGAATGGGTGATGAAATTGAAATGGAGCCTGTTGTTACTTCTAAGAGTGATGAAAATAAAAAGCCTGCCATAAAGGGATTTAATTTTGAGGACAACCGGATCATGAACTGCAACTGGTTGAAGGAGGCCAATTCTGATGTTCATTTGTTGTTTTTCCGGATATTGGCAGTGTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACGGGCAGTTTTACGTATGAAGCTGAGTCACCTGACGAGGGGGCTTTTCTTGCAGCAGCCAGAGAATTTGGTTTTGAGTTTTGTAAAAGGAATCAGTCTAGTATTTTCATCCGTGAAAGACTGTCTCCTTCTGGACAACCAGTTGAAAGGGAGTACAAAATCCTGAATTTGTTGGACTTCACCAGTAAAAGAAAAAGGATGTCTGTGGTTGTGCGTGATGAGGACAGCAACATTCTTCTTATGTGCAAGGGAGCAGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAAACATATTTGGAGGCTACTACTCGACATTTAAATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAACTTGATGAGCAAGAGTATTCTGTTTGGAATAATGAATTCCAGAAAGCAAAAGCAGCTGTTGGGTCTGACCGAGAGGAAACACTTGAACGATTATCAGATGTAGTGGAGAGAGAGTTGATTCTTGTTGGAGCTACTGCTGTTGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACAGGAGATAAGATGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATATGTATAACTACTATGAACTCAGGTTCATTAACCAACAGTGGAAAAGAGGCCATCAAGGAGAACATAATGAACCAAATAACCAATGCCTCACAAATGATCAAGCTGGAGAAAGATCCCCATGCTGCGTTTGCATTAATTATTGATGGTAAAACTCTGACATATACATTAGAAGATGATATGAAGCACCAGTTTTTGGGATTAGCAGTGGAATGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCGCTGGTAACAAGGCTGGTGAAGGAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCAGTGATGGCCAGCGACTTTGCCATTGCCCAATTTCGGTTTTTGGAGCGTCTTCTGGTAGTCCATGGGCACTGGTGTTACAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCCTGACCATATTTTATTTTGAGGCCTTTACGGGTTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGTTATTGTTCAACGTTGTTCTGACGTCATTACCTGTCATCTCACTTGGTGTTTTTGAACAAGATGTTTCATCGGAAGTCTGCTTGCAGTTTCCTGCACTTTACCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTAGGATGGATGGGCAATGGTCTCTATTCCTCCCTCATCATCTTCTTCCTCAACGTCATCATCTTCTATGATCAAGCCTTCCGCGCTAATGGCCAGACCGCTGACATGGCTGCCGTCGGTACAACAATGTTCACTTGCATCATTTGGGCTGTTAATCTTCAGATTGCCCTGACAATGAACCATTTTACCTGGATCCAACACCTATTGGTCTGGGGCAGTGTAACATCATGGTACCTATTTCTCTTGCTATATGGCATGATTTCTCCATACTACTCCAAGAATGCCTACCAAATACTAGTTGAAGCTCTTGGCCCTGCACCTCTTTATTGGATAGCAACCATTTTAGTAACAGTCACCTGCAATCTTCCTTATCTCACCCACATTTCCTTCCAAAGATGTTTTAATCCAATGGATCATCATATCATCCAAGAAATTAAGTATTATAAGAAGGACATTGAAGATCAAAACATGTGGACTAGGGAAAGGTCTAAGGCCAGACAAGAGACAAAGATTGGTTTCACAGCAAGAGTTGAAGCCAAGATCAGGCAGTTGAAAGGAAGGCTACAGAAGAAGCAATCATCTATAGGCGCTTTATCACCATCAAGAAACTGA 3681 0.4165 MARGRIRARIRRSNLYTFACLRPRTTEEGAHSLEGPGFSRTVLCNQPHLHEKKPLHYCKNHISTTKYNVISFFPKALFEQFRRVANIYFLLAACLSVSPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNRRKVSVHKGDGVFDLKAWQKIRVGDVVKVEKDQFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDNDGAFKDFTGTIKCEDPNPNLYTFVGNIEYERQVYPIDPIQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISMISSIGFAIKTKFQTPDWWYLQPMVAEYQYNPNNAALAGMSHLITALILYGYLIPISLYVSIELVKVLQASFINKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMGFLKCSIAGTAYGVRSTEVELAAAKQMASDFEEQESDLSNFPMPKNKSRGLSENNRMGDEIEMEPVVTSKSDENKKPAIKGFNFEDNRIMNCNWLKEANSDVHLLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLAAAREFGFEFCKRNQSSIFIRERLSPSGQPVEREYKILNLLDFTSKRKRMSVVVRDEDSNILLMCKGADSIIFDRLSKNGKTYLEATTRHLNEYGESGLRTLALAYRKLDEQEYSVWNNEFQKAKAAVGSDREETLERLSDVVERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTMNSGSLTNSGKEAIKENIMNQITNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMLLFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRANGQTADMAAVGTTMFTCIIWAVNLQIALTMNHFTWIQHLLVWGSVTSWYLFLLLYGMISPYYSKNAYQILVEALGPAPLYWIATILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDIEDQNMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSSIGALSPSRN 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0398 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele43g0398 1226 MobiDBLite consensus disorder prediction 468 485 - -
Lele43g0398 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1149 IPR023298 -
Lele43g0398 1226 FunFam Phospholipid-transporting ATPase 118 288 - -
Lele43g0398 1226 FunFam Phospholipid-transporting ATPase 724 921 - -
Lele43g0398 1226 SFLD p-type atpase 405 932 IPR044492 -
Lele43g0398 1226 FunFam Phospholipid-transporting ATPase 591 722 - -
Lele43g0398 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 41 1183 - -
Lele43g0398 1226 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Lele43g0398 1226 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lele43g0398 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Lele43g0398 1226 Gene3D - 432 459 IPR023299 GO:0000166
Lele43g0398 1226 Gene3D - 586 723 IPR023299 GO:0000166
Lele43g0398 1226 Pfam Cation transport ATPase (P-type) 546 651 - -
Lele43g0398 1226 Gene3D - 419 431 IPR023214 -
Lele43g0398 1226 Gene3D - 724 921 IPR023214 -
Lele43g0398 1226 Gene3D - 119 288 - -
Lele43g0398 1226 SUPERFAMILY HAD-like 410 925 IPR036412 -
Lele43g0398 1226 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Lele43g0398 1226 Coils Coil 448 468 - -
Lele43g0398 1226 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Lele43g0398 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lele43g0398 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Lele43g0398 1226 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele43g0398 1226 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Lele43g0398 1226 SFLD C1.7: P-type atpase like 405 932 - -
Lele43g0398 1226 MobiDBLite consensus disorder prediction 468 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0398 Lele-ChrLele43 3547042 3552898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0398 1 1222 Primary Pumps ATPases AT1G17500 75.552 0.0 1954