Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0376 ATGTCGTTTCTTTGTGATTATCGTCTGTTTCTTTGCTTCAATTTTGCTTCAACAATACCTTACCTGCTTTTGATGCTTCTGCAACACATGGGATTGCCTGATTATGCTTCCATCCTGATCGTAGCAGCACTTATAGCTGCACTTTTATTCTTCAGCCTCACCATGCTCGGTTGGTGTACCTACAGAAGCATTGATGTGATACAATCCATTCCACCTACAACAACAACAAACTCAGCTCTTGATGACAAGTTCCAATCCTTCACCACAAGCCTAGAGTCTCATTCCAAGACATTCCAGTTCAGAGCTGCAGAAGCTGTACCAGGAACTGATCAGACTGAATGCATCATCTGTTTGGCACTCTTTGAAGAAGAAGAGAGCGTGAGGCAGCTTCATAGCTGTAGACACATCTTTCATACGACTTGCATCGACATGTGGCTCGCTTCTCATTCTGGCTGCCCTTTGTGTAGAACCCAGATAGACCTTGTGCCACGTTCTCCAAATGATATTGAGGAAGCGTCCCTTCCAAGGTCTGTGGCTTCAGAGGAAAATGGCCACAATCAGATGATCTTGTTCCTTGTCAGCAGCTCCTGA 591 0.4501 MSFLCDYRLFLCFNFASTIPYLLLMLLQHMGLPDYASILIVAALIAALLFFSLTMLGWCTYRSIDVIQSIPPTTTTNSALDDKFQSFTTSLESHSKTFQFRAAEAVPGTDQTECIICLALFEEEESVRQLHSCRHIFHTTCIDMWLASHSGCPLCRTQIDLVPRSPNDIEEASLPRSVASEENGHNQMILFLVSSS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0376 196 Pfam Ring finger domain 113 156 IPR001841 -
Lele43g0376 196 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 36 162 IPR044675 -
Lele43g0376 196 SUPERFAMILY RING/U-box 113 163 - -
Lele43g0376 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 162 IPR013083 -
Lele43g0376 196 SMART ring_2 114 155 IPR001841 -
Lele43g0376 196 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0376 Lele-ChrLele43 3370568 3372118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0376 100 182 C3H Transcription Factor Family AT5G10380 44.048 1.29e-16 74.3