Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0375 ATGGGTGATGATGTGGACACTGGACTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATACACAGCTTCAGATGTCGCAAAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCACCTGGTCTTTCTTATGTAAATGTAGACAGCCAGTATTCTGCTGCTGATTTGCCTGTCGTGGATGGGATAATTCACTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAGATAACAGTCATAGTAATCAATCACAGAGTATTGGTGGGTGTTCTAGACCTTCTGAAGGACAGATAGAAAGTGGATCATCTACCTCTGCTGTCTATTCTACTTTGAAGCCTGATTTTTTGATGATAAAAGGAGAAATATCCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTAAAAGACAAGCAGTGGCTGAAGAGAAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCGGCAACAACTTTCATAGTTAGAGACAACATATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGATGCTGTACTCTTCAAGGATACTATGGCTGGGAAAGAGGATATCAACTGTAAGGATTCATCATGTGCTAAGGCTACTGGAAATGATGGTAATCAAATTGCTTCTGGAAAGAGACTGAGAAGTCATAAAGTGGAACATGATTTGTGTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAACTCTCTGAAAATGAGTCCAGGGACCACAATCCTAGGTTGTTAAGTTCAAACAGAAGTATGGAACTTGGACATGTCTCTCCAAACTCATACAATGGGCCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTTTTGTAACTAGGTTTGACTCTCTGGGGGGTTCTGGAATTTACATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGAAATTCCATCAAAGCGGTGACATGGTGGAGGTTGTCAACTTCAGCAATAAGGCCCTGGGAGATCATGGATGTCAGGATGATGAGGGATGGGATTTAAAATCAAGATCCACACCTGCAAAATTTCAGCAGCGATTTACTGTTGAGCAGAAAGATGAACTGTCCCCAGTAATGGACAGAATTGAGCCACGACAGGAATCAAGACTGAGAATGGCAGATCTATCTAGCTATAGTTTAGATGACAACATAGCGACAGTCCCCACTCCAAAAGGCGGAATGAGAAGGAAACATCATAGGGCATGGACCCTTGTTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCCTTCGCTTCCTACTCATACCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCACAGGCAGCTTCAGATGAGGGGATGAACTCACGGAAGCATGGTACAGTACCCATTCCCGAGCCAATTTTGGTACGAGTACGAGAGCTCGCCGGGATGAATTCTCAGGTACCTATAAGCTTCAGCTCAAGTAAACTAACAGCCTGCACTGGGGTTGATCATGATGATAGATCAGGGTACTTGTAG 1740 0.4282 MGDDVDTGLHEGCSSIERSSSEKLQLECSEDTAEADPGKLNTQLQMSQKVKEEEKLHLACGSPGLSYVNVDSQYSAADLPVVDGIIHCDTSFQEIIPSSAPSLDNSHSNQSQSIGGCSRPSEGQIESGSSTSAVYSTLKPDFLMIKGEISLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVRDNILVKKCEEGSDGNVDAVLFKDTMAGKEDINCKDSSCAKATGNDGNQIASGKRLRSHKVEHDLCSESLQTEQRAAKRIRKPTRRYIEELSENESRDHNPRLLSSNRSMELGHVSPNSYNGPARNVFSEGRTFVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMKFHQSGDMVEVVNFSNKALGDHGCQDDEGWDLKSRSTPAKFQQRFTVEQKDELSPVMDRIEPRQESRLRMADLSSYSLDDNIATVPTPKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGMNSRKHGTVPIPEPILVRVRELAGMNSQVPISFSSSKLTACTGVDHDDRSGYL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0375 579 MobiDBLite consensus disorder prediction 1 24 - -
Lele43g0375 579 SUPERFAMILY Homeodomain-like 461 520 IPR009057 -
Lele43g0375 579 SMART sant 463 516 IPR001005 -
Lele43g0375 579 MobiDBLite consensus disorder prediction 99 130 - -
Lele43g0375 579 Pfam Myb-like DNA-binding domain 466 514 IPR001005 -
Lele43g0375 579 ProSiteProfiles Myb-like domain profile. 467 514 IPR001005 -
Lele43g0375 579 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 561 - -
Lele43g0375 579 Gene3D - 456 561 - -
Lele43g0375 579 CDD SANT_TRF 465 515 - -
Lele43g0375 579 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 459 518 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0375 Lele-ChrLele43 3362471 3366851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0375 467 525 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 7.84e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele43g0375 Myb_DNA-binding 6.7e-07 CL0123