LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0369	ATGATGAATACTGCTACTACTGCAAGAAATAGGCCCCCTTTCACAGCTTCTCAGTGGCAAGAGCTTGAACAACAAGCTCTTGTTTTCAAATATATGGTCTCAGGAACACCGATTCCACCTGATCTCATTTACTCCATCAAAAGAAGCCTTGACTCTTCAATAGCTTCAAGGCTTTTCACTCACCATCCTGGTGTGGGATGGGGATGTTTTGAGATGGGTTTTGGGAGAAAAATTGACCCAGAACCAGGAAGATGCAGAAGAACAGACGGAAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCAAAATACTGTGAAAAACACATGCACAGAGGAAGAAATCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAAGTACCATTTCAACAACCACCTCGCAATCAATCTCACCGTATAGCTTTAACAGAGGTCTTTCAATGATGAGCAGCAATCCAAATAACAACAACAACAACACAGCTTCACTCTCTTCTTCTTTCCCTTTCCCTGAATCATCATCTCAATATCCTTACCAAAGTTCTTCTCTTAATCCCTTCTTTTACAACACCCATTCATCAACCTCTTCGAGAACTGATTCTGATTTCTCATCTCATGGCAACACTACCCATCAGCTATTTTTGGACTCTGGATCTTATTCTCAGGACGAGAAAGACTATAGAAATATTCATGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGAGTCAACTAGAAGCTTCCCGGACCCATACCACCACCAATTATCTATGAGCTCCTACAATAAAACCTATTCAAACTCTCACCAGTTTCAAGGCCTCAATGATAATGAGAGTAATCCAAGGCAACAACAAGAAGAGCAACATTGTCTCGTTCTAGGCACTGGCTTCAAATCACCAAAACCGAGCAAAAGTACTGAGGAAGCGACTAGTACTGAAACTACCCAGAGACCACTTCACCACTTCTTTGGGGATCAGTGGACTCAAAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCCAGAATTTCCACAGATGAATGA	1047	0.4193	MMNTATTARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLIYSIKRSLDSSIASRLFTHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTSTISTTTSQSISPYSFNRGLSMMSSNPNNNNNNTASLSSSFPFPESSSQYPYQSSSLNPFFYNTHSSTSSRTDSDFSSHGNTTHQLFLDSGSYSQDEKDYRNIHVDERAFFPEASESTRSFPDPYHHQLSMSSYNKTYSNSHQFQGLNDNESNPRQQQEEQHCLVLGTGFKSPKPSKSTEEATSTETTQRPLHHFFGDQWTQKNTDSWLDLASNSRISTDE	348

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0369	348	MobiDBLite	consensus disorder prediction	267	325	-	-
	Lele43g0369	348	Pfam	WRC	80	122	IPR014977	-
	Lele43g0369	348	MobiDBLite	consensus disorder prediction	107	170	-	-
	Lele43g0369	348	SMART	QLQ_2	12	48	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele43g0369	348	MobiDBLite	consensus disorder prediction	120	170	-	-
	Lele43g0369	348	PANTHER	GROWTH-REGULATING FACTOR 5	12	336	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Lele43g0369	348	MobiDBLite	consensus disorder prediction	267	290	-	-
	Lele43g0369	348	ProSiteProfiles	QLQ domain profile.	13	48	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele43g0369	348	Pfam	QLQ	13	46	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele43g0369	348	ProSiteProfiles	WRC domain profile.	79	123	IPR014977	-
	Lele43g0369	348	MobiDBLite	consensus disorder prediction	299	325	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0369	Lele-ChrLele43	3321685	3323134	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g0369	11	329	GRF Transcription Factor Family	AT3G13960	39.142	4.42e-70	222

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Lele43g0369		WRC	2.3e-21	No_clan