Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0360 ATGCCTTGCAGAAGAATTCTCTTGAAAAGCTTCGTTCTTGGCTGTTTCAAGACCAATCATCAATCTTCTTCTTCCTCGTACTCTTCAAATAGTAGTAAGGATAAGTGCTTGGCCTCTGGTAAGGTGAGCTCAAGAAGAGTGTGTCTCTCTGATCTGAGCAATTCTTCTTCTCTCTCTATCATGAGCGATCTCTCAAACTCTGTTCTGGGTTCAAATCTTCATATCTTCACCGTCAAGGAGCTGGAGGAGATCACAAACAATTTCTGCAAATCCAGTGTTGTTGGTGAAGGCGGATTTGGGAAGGTTTATAAAGGCTTCATTGATGATAAGCTCAGGCCTGGTTTAGAAGCTCAATGTGTTGCAGTTAAAGTTCTGGACTCAGATAGCAAACAGGGACACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAATTGAAGCATCCCCATCTGGTGAACTTGATTGGATATTGCTGTGAAGATGAACATAGACTTCTGGTTTACGAATACATGGAGAGAGGAAATCTAGAGAACAAGCTATTCAAGGGTTACTTAGCAGCCTTGCCTTGGCTCACAAGAATCAAGATAGCCACTGGCGCCGCGAAAGGACTCGCTTTCCTTCATGAAGAAGACCAGCCCGTCATCTACAGAGACTTCAAAACCTCAAACATCCTATTAGACTCCGATTACAATGCCAAGCTCTCTGATTTCGGTCTCGCAATAGACGGCCCAGAAGAAGAAGATCAGATTTATATCACAACTCGAGTTATGGGTACTCATGGTTATGCTGCTCCTGAGTACATAACATCTGGGCATTTGACAACGATGAGCGATGTTTATAGCTTCGGGGTGGTTCTGTTGGAACTGATTACAGGGAAGAGATCTGTGGATAAGAACCGTCCGATCAGAGAGAAGGATTTGGTGGAATGGGCGAGGCCATTGTTAAAGGACCCTAATAAGCTTGAAAGAATAATGGACCCAAGATTAGAGGGTCAATATTCTTATGAAGGAGCTAGAAAAATGGCATCTCTGGCTCACCAATGTCTGAGCCAGAACCCTAAGTCTCGACCCTCCATGCGAGCCGTGGTTAAGACCTTAGAGCCACTCATGAACCTAACTGATATAACGGTCGGCTGCTTTGTCTATGTGGTCCCCAGTGAAAATAAGCCGGTTCAATGCGGGAATGAATGTGAGCAGGAGGAGGAGGAGGAGGTAATGGAGCGGACGAAGACGAAGAAGATGAAGAAGAAGAAGAATCGAAAAGGTCAGAGACGAAGACGTCAGATTAAGATGCTGAGATCATCTGGTTCTGTTCATTCAGATACTTCTCTGTACAAAGTTCTTGGTACTAGCCTTTATTCTTCAATGCAATAA 1374 0.4432 MPCRRILLKSFVLGCFKTNHQSSSSSYSSNSSKDKCLASGKVSSRRVCLSDLSNSSSLSIMSDLSNSVLGSNLHIFTVKELEEITNNFCKSSVVGEGGFGKVYKGFIDDKLRPGLEAQCVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIATGAAKGLAFLHEEDQPVIYRDFKTSNILLDSDYNAKLSDFGLAIDGPEEEDQIYITTRVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKRSVDKNRPIREKDLVEWARPLLKDPNKLERIMDPRLEGQYSYEGARKMASLAHQCLSQNPKSRPSMRAVVKTLEPLMNLTDITVGCFVYVVPSENKPVQCGNECEQEEEEEVMERTKTKKMKKKKNRKGQRRRRQIKMLRSSGSVHSDTSLYKVLGTSLYSSMQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0360 457 Gene3D Phosphorylase Kinase; domain 1 51 170 - -
Lele43g0360 457 ProSiteProfiles Protein kinase domain profile. 88 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0360 457 FunFam Serine/threonine-protein kinase BIK1 55 170 - -
Lele43g0360 457 CDD STKc_IRAK 94 369 - -
Lele43g0360 457 MobiDBLite consensus disorder prediction 408 440 - -
Lele43g0360 457 ProSitePatterns Protein kinases ATP-binding region signature. 94 123 IPR017441 GO:0005524
Lele43g0360 457 PANTHER OS01G0588500 PROTEIN-RELATED 28 369 - -
Lele43g0360 457 Pfam Protein tyrosine and serine/threonine kinase 92 366 IPR001245 GO:0004672|GO:0006468
Lele43g0360 457 SUPERFAMILY Protein kinase-like (PK-like) 63 367 IPR011009 -
Lele43g0360 457 MobiDBLite consensus disorder prediction 411 432 - -
Lele43g0360 457 Gene3D Transferase(Phosphotransferase) domain 1 171 381 - -
Lele43g0360 457 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 171 377 - -
Lele43g0360 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0360 Lele-ChrLele43 3263260 3265003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0360 74 411 Glycoside Hydrolase AT3G07070 46.628 5.63e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele43g0360 PK_Tyr_Ser-Thr 2.1e-47 CL0016