Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0340 ATGTCGAAATTCCCCGACCCGGCGGTGGATGGCCGGAGAGTCGGCAAGGCGCCGGAGAGGTCCAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGCGAGGGTCTGGATCTTTAGGCCTTGGGATGGCTGGGAAAATGGAATCTAGAGCAATTACGAAGGACTCGACGACAAACCTGGAAAATCCTGATGATACATTGAGACTTGATGCTTCTGCTATGGAATGTCTTCCTCAGTTCGTGGAAAATGCCTGCATCAAGAAGTCTGACTCGAGATCAGACCCTGAACCCCAAATGACGATATTTTATGCCGGAAAAGTGTTAGTGTTTAATGCTTTTGCTCCCGAGAAGGCCACAGAGATCATGGAGCTAGCCACCAAATTAAGCTCTGATAGTACTGTTTCTGACATGAACAAGAACCTCCCAAGTGCTTCTACTGCTAAAGAAAATCAGGATGTGGCCAAAGTTGCTCAAAACAACACTGCTCAGGAAGAGGCAGTTCCAAAATCAGGACCTCCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAATTCCTGGAGAAGAGGAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACGGTCCACATAATCCAAAGCCGGATGAAAGCAGTTCAGGAGACCCTGAGCAAGGCCAATCTTCCAAATCATTTGACCTTAACATATAG 720 0.4639 MSKFPDPAVDGRRVGKAPERSNFTQYCNVLSQLLKEKRGSGSLGLGMAGKMESRAITKDSTTNLENPDDTLRLDASAMECLPQFVENACIKKSDSRSDPEPQMTIFYAGKVLVFNAFAPEKATEIMELATKLSSDSTVSDMNKNLPSASTAKENQDVAKVAQNNTAQEEAVPKSGPPPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNGPHNPKPDESSSGDPEQGQSSKSFDLNI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0340 239 MobiDBLite consensus disorder prediction 203 239 - -
Lele43g0340 239 MobiDBLite consensus disorder prediction 135 186 - -
Lele43g0340 239 MobiDBLite consensus disorder prediction 135 170 - -
Lele43g0340 239 SMART tify_2 96 131 IPR010399 -
Lele43g0340 239 MobiDBLite consensus disorder prediction 215 239 - -
Lele43g0340 239 Pfam tify domain 101 129 IPR010399 -
Lele43g0340 239 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 222 IPR040390 -
Lele43g0340 239 Pfam Jas motif 187 209 IPR018467 -
Lele43g0340 239 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0340 Lele-ChrLele43 3006070 3008653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0340 12 225 Tify Gene Family AT1G19180 34.286 1.38e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele43g0340 tify 4e-14 No_clan