Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0334 ATGGCTAATTCTTCCTTGGATATTGTGTCCTCCTACTCCTCAATCTCAGCCCCAAATTCACGTTGCTATTACCCATCTCCTGCAAACTCTCGTAATGTCTCTTTCTTCTCCACAGCCTCTACCTCTCACACCGACATAAGAGCTCCACCAGCCTCACCCTTTTATTCAGACCAAGCACATTCTTGGAGGGAAGAAATTTCGTGGCAGATTGAGCCCAATGAGCGACTCAACTACCCTAAAACCCTAGGCTCTGCTCTGAGTCAGTGGACACCTTCTGATCTCAGTCAGAAATTTCGTCGAACAACTTACGACCATCATCTCCACCGAACGTACGAAAATGGAAAAATGGAGCTTCGGAGCTTCGATGCAAGTGAGTGTGAAATTGAGAAGAGAAGTGCATTAGGAGAAGAAGATGAGGAGAGTATGATTGGGTATAACAGTGAAGTGTTGCATGGAAGTTATTACAGTGAGAGTGATTGCGATGAGAAGGGGAAGGAGAAGGAATCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTGGAGTGATGGGGTTGTTTAGGTACACAACGAAGTGGGATATGGTGATAGTGATGTTGGGGTGTGTTGGGGCGATCATCAATGGAGGATCACTGCCTTGCTATTCATATCTGTTTGGTGAGTTGGGCACTAAGATTGCTACTGAAGCATACGCTGGTCACCAAACACAGATCCTTAAGGACGTTCAACAGGTGACTCATCCTACTACTTTTCATTTCTTCCTCCAACGCAGACATATTCAAGCCTTAAAGATCACATGTTGGAGGTTGGTGGGAGAAAGATCTGCTCAGAGAATAAGAAGTGAGTACTTGAAAGCAATTCTTAGGCAAGACATTGCCATTTTTGACACACAGATGAGCACTGGTGATATCATGCATGGAATTGCAAGTGATGTTGCTCAAATTCAAGACGTCATGGGAGACAAGATGGCTCACTTCATTCATCACGTGTTTACATTCATTTGTGGGTACACAGTTGGGTTTCTAAGGTCATGGAAGGTTTCTCTTGTGGTTCTCTCAGTCACCCCTCTCACTCTTTTATGTGGCATAGCCTACAAAGCTGTTTATGGAGGTCTTTCAGCAACACAGGAAGCTTCATATAGGAAAGCAGGGAGCATAGCAGAGCAGGCCATAAGATCAATGAGGACAGTGCTTGCTTTTGTTGCAGAAAGCCAAATGGCTTCAAAATACAGACAAGCACTGCAAAAATCAGAGCCATTTGGGGTAAAGATAGGGTTTGCAAAAGGTGGAGGCATGGGATTAATCTATTTCATAACCTACTCGACATGGGCATTGGCTTTTTGGTATGGTTCCCTCTTAATTGCCAGAAATGAGATTGATGGTGGGGCAGCCATTTCAGAATTTCAGTGTCTGATTGTTAGCTTAAAGATGACATTTTATGGCAGGATAGCAACAGTAAGGAACGCTCACACCATTGTAGTTCTTGAATGTGGTTCTGTGACTGAGATTGGTGACCATCACCAGCTTATGAGAAACGCTGGAACATATTATAACCTCATCATGCTTGCTTCTGAAGAATCTGATCCCATCTCAAAACCTAGGCCGCCTGAAGAGTATGTCACACAAAAGGCTAATGACTTCTCCATCTATGAGAAATCATCTACTGATATCTCAAGGTTCACCTCTAAGTACTTGATATCTATGGATGAAGAAGAACTAGAAGATATGGATCATACACAAAAGAAGAAGCCAAGAAAATTCAGACTCTATGAGATATGGAAACTGCAAAAGCCAGAGCTTGTGATGCTATTGTTGGGATTCCTTCTAGGTATGCTTGCAGGTGCTTGCTTGTCCCTCTTTCCCTTGGTTTTAGGCATGGCCCTTGAAGCATATTTTCATGAAGACACTTCAAAAGTGAGAAGAGATGTCGGTCGCCTTTGTCTGGCGCTTGTTGGTCTTGGTTTTGGATGCATCATCTCCATGACAGGTCAACAAGGTCTGTGTGGCTGGGCTGGAACAAAACTCACATTAAGGGTTACAGACCTTCTGTTTCAAGCCAGACTAAAACAAGAACCGGGATGGTTTGATTTCGAAGAAAACTCCACCGGCGTGTTAGTTTCAAGGCTTTCCATTGACAGTGTTATCTTTCGTTCGGTTCTTGGTGATAGATTTTCAGTCCTTTTAATGGGGTTGAGTTCGGCTGCTGTAGGGTTTGGTGTAGCCTTTTCCCTTGAATGGAGATTAGCCCTTTTGGCTGCTGCTTTATCCCCATTTACTCTTGGTGCTAGCTACTTAAGTTTGATCATAAACATAGGGCCCAAAGTTGATGACAATTCTTATGCCAGAGCTAGTAATATTGCTTCTGGTGCAGTTTCAAACATAAGGACAATCACAACTTTATCTGCCCAAGAACAAATAGTAAAGTCCTTTGAACAAGCCTTGTTAGAGCCCAGGAGAAAATCTATAAAGAAGTCACAAATTCTAGGCCCAACACTTGGGATTTTTCAAGGATCCATGTATGGAGCATACACATTAATTCTTTGGTCTGGCTCCTACCTTGTGAAACAGAACAAAACAGAATTTGGAGATGTTTATAAGATCTTTCTCATTCTTGTTCTGAGCTCATTTTCTGTGGGACAACTAGCAGGCTTAGCACCAGATACTTCCATGGAAGCTACAGCAATTCCTGCAGTTCTTGATATCATAGATCTTAGGCCATCGATAGGCAATGATAGAACAAAAAAGGAAGCTGACATGATCGCGGTTATGGAAGATGGCACGGTGGTGGAATCTGGAAGCCATGAAACTCTCATGGCTTCTTCCCATGGTGAAGATGAAGGTTTGTATGGTAGCTTTGTTCGTGCTCAGACAGAGGCCAATGCCTTTTCTGCTATGTCTGAGGATTTGTAA 2907 0.4307 MANSSLDIVSSYSSISAPNSRCYYPSPANSRNVSFFSTASTSHTDIRAPPASPFYSDQAHSWREEISWQIEPNERLNYPKTLGSALSQWTPSDLSQKFRRTTYDHHLHRTYENGKMELRSFDASECEIEKRSALGEEDEESMIGYNSEVLHGSYYSESDCDEKGKEKESRRRRRRRRRRVGVMGLFRYTTKWDMVIVMLGCVGAIINGGSLPCYSYLFGELGTKIATEAYAGHQTQILKDVQQVTHPTTFHFFLQRRHIQALKITCWRLVGERSAQRIRSEYLKAILRQDIAIFDTQMSTGDIMHGIASDVAQIQDVMGDKMAHFIHHVFTFICGYTVGFLRSWKVSLVVLSVTPLTLLCGIAYKAVYGGLSATQEASYRKAGSIAEQAIRSMRTVLAFVAESQMASKYRQALQKSEPFGVKIGFAKGGGMGLIYFITYSTWALAFWYGSLLIARNEIDGGAAISEFQCLIVSLKMTFYGRIATVRNAHTIVVLECGSVTEIGDHHQLMRNAGTYYNLIMLASEESDPISKPRPPEEYVTQKANDFSIYEKSSTDISRFTSKYLISMDEEELEDMDHTQKKKPRKFRLYEIWKLQKPELVMLLLGFLLGMLAGACLSLFPLVLGMALEAYFHEDTSKVRRDVGRLCLALVGLGFGCIISMTGQQGLCGWAGTKLTLRVTDLLFQARLKQEPGWFDFEENSTGVLVSRLSIDSVIFRSVLGDRFSVLLMGLSSAAVGFGVAFSLEWRLALLAAALSPFTLGASYLSLIINIGPKVDDNSYARASNIASGAVSNIRTITTLSAQEQIVKSFEQALLEPRRKSIKKSQILGPTLGIFQGSMYGAYTLILWSGSYLVKQNKTEFGDVYKIFLILVLSSFSVGQLAGLAPDTSMEATAIPAVLDIIDLRPSIGNDRTKKEADMIAVMEDGTVVESGSHETLMASSHGEDEGLYGSFVRAQTEANAFSAMSEDL 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0334 968 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 259 465 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0334 968 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 603 889 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0334 968 PANTHER ABC TRANSPORTER B FAMILY 481 521 - -
Lele43g0334 968 Pfam ABC transporter transmembrane region 198 462 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0334 968 Pfam ABC transporter transmembrane region 602 873 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0334 968 Gene3D ABC transporter type 1, transmembrane domain 184 473 IPR036640 GO:0005524|GO:0016020
Lele43g0334 968 Gene3D ABC transporter type 1, transmembrane domain 566 910 IPR036640 GO:0005524|GO:0016020
Lele43g0334 968 Gene3D - 912 956 IPR027417 -
Lele43g0334 968 Gene3D - 481 523 IPR027417 -
Lele43g0334 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 519 IPR027417 -
Lele43g0334 968 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 776 916 - -
Lele43g0334 968 CDD ABC_6TM_Pgp_ABCB1_D2_like 612 907 - -
Lele43g0334 968 CDD ABC_6TM_Pgp_ABCB1_D1_like 199 473 - -
Lele43g0334 968 SUPERFAMILY ABC transporter transmembrane region 185 468 IPR036640 GO:0005524|GO:0016020
Lele43g0334 968 SUPERFAMILY ABC transporter transmembrane region 582 905 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0334 Lele-ChrLele43 2962747 2968958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0334 481 910 Calmodulin-binding Proteins AT2G36910 28.889 5.79e-49 187