Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0309 ATGTGTGGAGGTGCTATTATCTCCGACTTCATACCGGCAGCGGCGGCCGCGGCAGCCGGAACAGGGAGGAGGTCTCGCCGGCTGACTGCCGATTATCTGTGGCCAGATTTGAACAAGCTTGGTGCTGGTAGGAGGTTTTCCAAGCCACTGAAGCATGAAACTGTCATCGACATGGACGATGATTTTGAAGCTGATTTCAGGGAATTCAAGGACGATTCCGATATTGATGTTGATGAAGATGATGATGATTTGATGATTGATGTCAAACCCTTTGCTTCATCCGCCACTAAGTCCTCTAAGAGGCCCCTGTCTCGTGGATCTGCTGCTGCAAAAACTGAGAAATCCGATGTGCAAGCTGAGAAGTCTTTGAAAAGGATGAGGAAGAATCAATACAGGGGAATCCGCCAGCGACCGTGGGGCAAATGGGCGGCTGAGATCCGCGACCCGAGAAAGGGGGTTCGTGTCTGGCTCGGAACCTTCAATACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGAAGGATCCGCGGCAAGAAAGCCAAGGTCAACTTCCCTGATGAGATTTCAGTCAATTCGTCAAAGCGTATCAAGACCAGCAAAGTTGAGAAGCCGCTTCCAAAGGCCAATCTGACCCAAAACTTCAATGCTGGAACCAATCTGGAGGACTATTACTACTCCATGGGTCTGATGGAACAGAAACCACAGATCAACAACCAGTTTGCTGCTCCTGCTACTGCTAACATGGGATCATTCCCTGAGACTAACAATGTGGTCCCATCAATTGCATCCTCTGATGATGTCACTGTTTACTTCAGTTCCGATCAGGCCAGCAACTCATTCGACTACTCTGATTTAGGATTTGGCGAGCAGGCTCCAAAGACCCCAGAAATCTCATCCATGCTGTCTGGTGAATCTCAGTATCTGCAAGATTCTAACCAGAACAACAACAACTATAACAACAACAACAACATGCAATACTCGAACTCTGAGAATGTTGTACCTGCTGAAAATGGTTCCGGAAAGACTCTGTCTGACGAACTGGCTGACATAGAATCGGAGCTGAAGTTCTTTCAGACACCTTATCTTGATGGAAGCTGGGATGATGCTTCACTGGGAAGCCTGCTGAGTGCAGAGACAACACAGGATGCTGCAAACCCAATGAGCCTGTGGAGCTTTGATGACCTACCTCCATCCATGATGGGGGGAGTTTACTGA 1221 0.4848 MCGGAIISDFIPAAAAAAAGTGRRSRRLTADYLWPDLNKLGAGRRFSKPLKHETVIDMDDDFEADFREFKDDSDIDVDEDDDDLMIDVKPFASSATKSSKRPLSRGSAAAKTEKSDVQAEKSLKRMRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEISVNSSKRIKTSKVEKPLPKANLTQNFNAGTNLEDYYYSMGLMEQKPQINNQFAAPATANMGSFPETNNVVPSIASSDDVTVYFSSDQASNSFDYSDLGFGEQAPKTPEISSMLSGESQYLQDSNQNNNNYNNNNNMQYSNSENVVPAENGSGKTLSDELADIESELKFFQTPYLDGSWDDASLGSLLSAETTQDAANPMSLWSFDDLPPSMMGGVY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0309 406 MobiDBLite consensus disorder prediction 297 340 - -
Lele43g0309 406 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 MobiDBLite consensus disorder prediction 95 130 - -
Lele43g0309 406 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 SMART rav1_2 130 194 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 CDD AP2 130 188 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele43g0309 406 SUPERFAMILY DNA-binding domain 130 189 IPR016177 GO:0003677
Lele43g0309 406 MobiDBLite consensus disorder prediction 293 344 - -
Lele43g0309 406 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele43g0309 406 PANTHER DNA-BINDING DOMAIN 100 315 IPR044808 GO:0003700|GO:0009873
Lele43g0309 406 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0309 Lele-ChrLele43 2792734 2795012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0309 1 406 AP2-EREBP Transcription Factor Family AT1G53910 46.336 1.36e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele43g0309 AP2 2.1e-12 CL0081