Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0299 ATGACCGCGGGGGACAGGAGGCTTCTGCAGTCGGAGATGGTGACACCAAACGTGGTGGTGGCTGCTGATTGGAGCGGATATTACAGGACGGTGTCGGAGGCGGTTGCGGCGGCGAGGAGTAGCACGAGCAGAACCAACACTATCATCACAGGAAACAGAGATGTGGTTGATGGAAGCACAACCTTTCACTCTGCAACTGTGGGTAAGAAACGGATTCATGGCTCGAGAAATAACCTTCCAAAACTCAGCGGGGCCATCGAAGGGCCTGCTCCGATCTCTCCGCCTTCTACAGATCAATGTGCCTTCCTTACTTACCAGGACACCCTCTACGTCCACAGCAACCCCCAGTTCTTCACCAACTGCATGGATTTGGAGGGAGAGAAGGGAATGAAGTGTGAGATCGTACCTTGGGAGGCCATGGGGGAATATCCAAGGATACATCACAACGCTGGAAATGGTGCTCATACTTCTGGAAGGGTTAACTGGAAAGGCTTTAAGGTTATTATCAGTTCTTCTGAAGCTCAAAGTTTTACTGCTCAAAACTTCATTGCTGGTTCAACCTGGTTACCTTTCACAGGCTTTCCATATACTCTTGGCCTATAA 603 0.5025 MTAGDRRLLQSEMVTPNVVVAADWSGYYRTVSEAVAAARSSTSRTNTIITGNRDVVDGSTTFHSATVGKKRIHGSRNNLPKLSGAIEGPAPISPPSTDQCAFLTYQDTLYVHSNPQFFTNCMDLEGEKGMKCEIVPWEAMGEYPRIHHNAGNGAHTSGRVNWKGFKVIISSSEAQSFTAQNFIAGSTWLPFTGFPYTLGL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0299 200 Gene3D - 132 200 IPR012334 -
Lele43g0299 200 Pfam Pectinesterase 44 122 IPR000070 GO:0030599|GO:0042545
Lele43g0299 200 Pfam Pectinesterase 147 185 IPR000070 GO:0030599|GO:0042545
Lele43g0299 200 SUPERFAMILY Pectin lyase-like 13 199 IPR011050 -
Lele43g0299 200 PANTHER PECTINESTERASE 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0299 Lele-ChrLele43 2712782 2714903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0299 145 200 Carbohydrate Esterase AT3G14310 55.357 8.70e-15 70.1