Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0295 ATGGGTGACTCATTAGTGTCTAATGACAAATTGAACGAATCTCCCGGAGTTGAAGTGACCGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTTTGTTTGTTCTGTTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACTCCTCCGCCGCCTCGTCGTCGCCGTCGACGCCGCTTTGTCTTCGCCCCTGGGCAAGATCCAGAAATCTACGGCGGCCAGAGAAGCGGACTCGATCCTTCACTGCTTTTGTCCTTACCAGTAATAATTTACCAACCTGAAAATTTCAAAGATGGCTTGGAATGTGCTGTTTGTCTCTCTGAGCTTGTTCAAGGAGAAAAAGCGAGGCTTTTACCCAAATGCAATCATGGATTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCCACTTGTCCCCTTTGTAGAAACCCAGTCGCTTCTGAAACTCCTAAGTGCAATAGCAGTTCAAGTGTTCGAGAAGATTCCGCGGAGAATACTAGTAGCCAATCACAAGCGTCAGAAAATTTTCAAAACTCTACTTTAGCTGCTATTAGTGGTTCAGTTTCAGAGACTCCAAAATTTCCAACTAATGTGTTGGTTTGGGGGAATCAGACTCAAGTTAGTTCTATTAATACAGCTTCAGAAGAAGAGGGTCCTTCTTCTTCATCTTCTTCTTCTTCTTCTACTACAGCTACTAGCAGTAGCAGTAACAATAGACGCCTTGAAATGATGGTGATTGATATACCAAGTGAGGTGAATTCTTCATCTTTATCTCCTTCTTCAAACAGGTTTGCTGAAGATGAGCTGAAATCACCGATGACCACAAGACTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTGTAATCCTGGTCCTGGCACTATAGATGTTGAACAAGCAGGGAGAGGACAGAACTAG 963 0.433 MGDSLVSNDKLNESPGVEVTGKIMVLAIIILFMVVLFVLFLHLYAKWFWWSIEETTPPPPRRRRRRRFVFAPGQDPEIYGGQRSGLDPSLLLSLPVIIYQPENFKDGLECAVCLSELVQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVASETPKCNSSSSVREDSAENTSSQSQASENFQNSTLAAISGSVSETPKFPTNVLVWGNQTQVSSINTASEEEGPSSSSSSSSSTTATSSSSNNRRLEMMVIDIPSEVNSSSLSPSSNRFAEDELKSPMTTRLRSLKRLLSRDKRLGPCNPGPGTIDVEQAGRGQN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0295 320 MobiDBLite consensus disorder prediction 261 280 - -
Lele43g0295 320 CDD RING-H2_EL5_like 109 152 - -
Lele43g0295 320 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Lele43g0295 320 Pfam Ring finger domain 109 152 IPR001841 -
Lele43g0295 320 MobiDBLite consensus disorder prediction 261 278 - -
Lele43g0295 320 MobiDBLite consensus disorder prediction 157 186 - -
Lele43g0295 320 SUPERFAMILY RING/U-box 93 158 - -
Lele43g0295 320 SMART ring_2 110 151 IPR001841 -
Lele43g0295 320 FunFam RING-H2 finger protein ATL3 79 157 - -
Lele43g0295 320 MobiDBLite consensus disorder prediction 295 320 - -
Lele43g0295 320 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 247 - -
Lele43g0295 320 MobiDBLite consensus disorder prediction 220 250 - -
Lele43g0295 320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 161 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0295 Lele-ChrLele43 2695642 2696604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0295 1 298 C3H Transcription Factor Family AT1G53820 45.223 1.90e-72 224