Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0291 ATGGCTGGCTGTGGGCATGTGGAAGTTAATTTCTGGAGTTCTGTATCCACTGCGGCTTTACAGGCCATGTTTAATGGAATGAACTCACCATCCCAACTAGGTTGGCCAGTAAATGGCGGCGATCCCTGCGGACAGACTTCTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTTGGTTACCAGTTACAAACCATGACATCGGTGACCAACCTAAATGTTGCTCGCAATCAACTACAGAATGGACTGAGTGACGTGTTTCAAAAGCTTTCTAAGCTAGCCACACTGTATCTGCAAAACAACCAGTTTACAGGGACTATTGATGTCCTCGCCAATCTGCCTCTTGATAATCTGAATGTGCAAAACAACCGTTTTACAGGCTGGATACCGGAACAGCTGAAAGGCATTAACCCCCAGACATCGGGAAATACATGGAACTCAGGTCCTGCCCCCCCTCCACCTCCTGGGACACCCCCTGCACCTAGAGGGAACCGGCATCACAAATCTGATGGAAGTAATAGCTCTTCAGATGATGGCAACAGTGATGGGGGGAAAAAATCTGGTATAGGAGCCGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCAGTGGTTGCTTTCTTTTTGATGAAAAGAAAATCCAGGAAGTCATCTTCAGATATAGAAAAGCATGACAATGAGCCTTTTACTCCTTCTAGTTCAAACGAACTGCATGAAGTGAAGTCCATGCAAGCTCCCCCGGTGGTTGACATGAAGACATTTGATACTTCTGCCTCAATAAATATTAAACCCCCACCTATTGAACGTCGCAAATCATTTGATGAAGATGAATTTTCCAAGAGGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCTGCAAATGTGAAATCATATTCTATAGCAGATCTACAGATCGCCACTGGGAGCTTCAGTATGGATAACCTCCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCATCTATCCTTCCCCATGATTCAGATGATTTTATGGAAATTGTTTCAAACATCTCCAACTTGCACCATCCAAATGTGACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGCGGATCCCTACATGACTTCCTTCACTTATTAGATGAATATAACAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCGCCATCAGTTGTTCATAAGAACATTAAGTCAGCCAACATATTGCTTGATGTGGACCTCAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCAAATGCTGACCAGGTCTTGAACCGTAATACTGGATCTGGGTATGATGCACCCGAAGTTGCTTTGTCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTCGATAGCTCAAGACCAAGATCTGAGCAATCTTTAGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTCTGGAGGGGCTATACCCTGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCTCTCTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCTGAGGTGGTTCAAGCGTTGGTTCGCTTAGTGCAGCGAGCTAACATGAGTAAGAGAACATTTGGAACAGATCAAGGAGGAGGATCCAATCGAGGAGGCGATGATCAAGACACACAAGATATGTAA 1896 0.4404 MAGCGHVEVNFWSSVSTAALQAMFNGMNSPSQLGWPVNGGDPCGQTSWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTNLNVARNQLQNGLSDVFQKLSKLATLYLQNNQFTGTIDVLANLPLDNLNVQNNRFTGWIPEQLKGINPQTSGNTWNSGPAPPPPPGTPPAPRGNRHHKSDGSNSSSDDGNSDGGKKSGIGAGGIAGIVISILLVGAVVAFFLMKRKSRKSSSDIEKHDNEPFTPSSSNELHEVKSMQAPPVVDMKTFDTSASINIKPPPIERRKSFDEDEFSKRPIIVKKTVKAPANVKSYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSDDFMEIVSNISNLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLLDEYNKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDVDLNPHLSDSGLASYIPNADQVLNRNTGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGGSNRGGDDQDTQDM 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0291 631 PANTHER LEUCINE RICH REPEAT KINASE 2 55 604 - -
Lele43g0291 631 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 290 402 - -
Lele43g0291 631 Pfam Leucine rich repeat N-terminal domain 17 54 IPR013210 -
Lele43g0291 631 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Lele43g0291 631 MobiDBLite consensus disorder prediction 149 198 - -
Lele43g0291 631 Gene3D Ribonuclease Inhibitor 16 157 IPR032675 -
Lele43g0291 631 SUPERFAMILY L domain-like 41 148 - -
Lele43g0291 631 ProSiteProfiles Protein kinase domain profile. 326 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0291 631 MobiDBLite consensus disorder prediction 608 631 - -
Lele43g0291 631 Gene3D Transferase(Phosphotransferase) domain 1 404 616 - -
Lele43g0291 631 Pfam Protein tyrosine and serine/threonine kinase 328 597 IPR001245 GO:0004672|GO:0006468
Lele43g0291 631 MobiDBLite consensus disorder prediction 608 624 - -
Lele43g0291 631 SUPERFAMILY Protein kinase-like (PK-like) 310 597 IPR011009 -
Lele43g0291 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 403 611 - -
Lele43g0291 631 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Lele43g0291 631 MobiDBLite consensus disorder prediction 160 174 - -
Lele43g0291 631 Coils Coil 631 631 - -
Lele43g0291 631 MobiDBLite consensus disorder prediction 231 245 - -
Lele43g0291 631 MobiDBLite consensus disorder prediction 231 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0291 Lele-ChrLele43 2662652 2667462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0291 54 630 Strubbelig Receptor Gene Family AT1G53730 67.687 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele43g0291 PK_Tyr_Ser-Thr 3.1e-42 CL0016