Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0288 ATGAAGCATAGAGACAGAATGGAAGAAATCAAGAATGTCGGGCCGAAGTTTGAACGGTGGTTAAACCCAACGCTCTTCCCTTCATTTTCCAGACTTCCTGGTGGCTACTTTTTTCAACCTGTCCTAACAGCAATTGGGAACTTCTGCATTTGCTCTATAGCTGCAGGAATGGCACGTGCAAACATAACTGAAGTTCATTTTCTACCTTTCAAACCACTTGATAAACGTACCGCATTACATAAATTGATTCTGAAGGCAACTGGTATAGATCCAAAAACGGAGCTCCTGAACAGCCAAGAGAAAGATGAGATTGCTGGGAAAGTGCGGGCAATCATTGACAAGTTTGCTGAAAGGGGCCCGCGATCTCTTGCTGTTGCTTATCAGGAAGTTCATGAAAAATCTAAGGATAGTCCTGGAGGTCCTTCGACCTTCTGTGGGTTGTTGCCCTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACCATCCGTAGAGCACTAAATCTCGGATTCTGTCTCAAGATGATTACTAGTAAATATGAATCCATAATCATTTTAGCAGATGAAAATGAAGCTCTCCCAGTAGATGAGCTGATCGAAAAGGCAGATGGCTTTGCCGGTGTTTTTCCAGATGCTGCAAGAAGTGCTGCTGATCTAATCTTAACTAAGCCAGGCTTAAGTGTGATTGTCAGTGCCGTGTCAACCGGCCGAGCTATATTTCAAAGAATGAAAAACTATACAATATATGCAGTTTCTATAACCATAAGGATAGTGCTTGGTTTTGTGCTCCTGGCATTGATCTGGGAGTACGATTTTCCACCTTTCATGGTTCTGATCATAGCAATACTGAATGATGGAACTATCATGACCATATCCAAAGGCAGGACCACTTTCTTTAAGACCCACTTTCATGTAACCTCCTTATCCAGCGACAGTGAGAAAGTTTCATCTGCTGTGTATCTTCAAGTTAGCATCATTAGCCAAGCTTTATTCTTTGTTACCCGTAGTAGAGGCTGGTCTTTTCTGGAGAGACCTGGAATGCTGTTGATGTGTGCCTTTGTAATTGTTCAATTGACTGCTTTTACTTCGAAGAAAGACTACGGGAACGAAGATAGAGCCGCAAAATGGATTCTTTCTCAAGCCTACAAGGATGGAACTCCATAA 1161 0.4246 MKHRDRMEEIKNVGPKFERWLNPTLFPSFSRLPGGYFFQPVLTAIGNFCICSIAAGMARANITEVHFLPFKPLDKRTALHKLILKATGIDPKTELLNSQEKDEIAGKVRAIIDKFAERGPRSLAVAYQEVHEKSKDSPGGPSTFCGLLPLFDPPRHDSAETIRRALNLGFCLKMITSKYESIIILADENEALPVDELIEKADGFAGVFPDAARSAADLILTKPGLSVIVSAVSTGRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKGRTTFFKTHFHVTSLSSDSEKVSSAVYLQVSIISQALFFVTRSRGWSFLERPGMLLMCAFVIVQLTAFTSKKDYGNEDRAAKWILSQAYKDGTP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0288 386 PANTHER CALCIUM-TRANSPORTING ATPASE 300 359 - -
Lele43g0288 386 Gene3D - 152 210 IPR023214 -
Lele43g0288 386 Gene3D - 211 223 IPR023214 -
Lele43g0288 386 SUPERFAMILY Calcium ATPase, transmembrane domain M 235 360 IPR023298 -
Lele43g0288 386 Gene3D - 58 151 IPR023299 GO:0000166
Lele43g0288 386 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 60 157 IPR023299 GO:0000166
Lele43g0288 386 Gene3D - 224 294 - -
Lele43g0288 386 Gene3D - 295 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0288 Lele-ChrLele43 2603789 2608878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0288 58 359 Primary Pumps ATPases AT1G17260 54.634 4.16e-131 397