Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0279 ATGGAATTGCTGATGCAAGATGTCAAAATGCATTCTGACGATAAAGAGGAAGACGACGAGGAAGAGGACGAAGAAGGAGCAGAGATAGTTAGAGGGGAAAGTAGCCACTGTAAGAATTACCTTTCTTTCTCAACAAATTACGCAACCAGTACTCGTCGTCTTCTTCATAATCATCATGATCCTCATCAAAATTCATGGCTGGGTCTTCATGATCGTCATCACTCTCCACCAGATGCTGCTACAGCCATCGAATCTCTCAATTCATCGCCTCGATTAGGGTTAGCATCAGCACCGACCGCCAATTTCGCCCGTAATCACAGAAAGTCGGACCTCATGGACTTGTCGCTCGGAGGAATTGGAACCGGCAAATACGATGAGGAACAAGGAGCCAATTTCCATGGAGGAGGAAGCAGCAGTAACGATGTTGGTGCTTCTATTGAGAAAGAGCACATGTTCGATAAAATCGTCACTCCCAGTGACGTAGGCAAGCTCAACCGCCTCGTAATACCAAAGCAACACGCAGAGAAGTACTTCCCTCTCGATTCCTCCTCCAACGAGAAAGGGCTGCTCCTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTACTGGAATAGTAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCGACGCCGGAGACGTTGTCTCTTTCCACCGCGGCGCCGGAGAGTCCTATCAGCACCGGTTGTACATAGATTGGAGGCGAAGATCTCATCACGGCCCACCCGGCCCTGATCCCAACTTGATTACACCTTTCTTTCTTCATCATCCCAATCAGGCGACGACTCAATTTTCTCAGTACTCTATCAGATGGGGCGGCCGATTGTTCTCCCTTCCTTCTCCTGCACTGCCACCGCGACAGCAGAACCATAGTAATATGTTCCCCTTGTATCATCATCAACAGCAACAAGAGCGACACCATCATCATCATCCATGGCAGTACCAAGTCCATCATCATCATCATCATAATGCGACGAATTCAAGATCTGCAGGTCCGGTGTATTCGAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCAATGATTATAGATTCTGTTCCAGTTGATCATTATCATCATTCTCATCAAAACTATTACCATGGTAAAAATAGTAGTGCTCCTAATAATACTACTGCTGGTAAAACAATTAGGCTATTTGGGGTGAACATGGAATGTGCTTCATCGTCTTCTTCTTCTTCATCACCACCAGTGGAAGAATCGAGGTGTTGTAATGTGACAGTAATGGCTAATCCATCAATTTCACCTTCGTCTTCTATCATCCCACCGCCTCTTCATCAGTATCTGAGAGTACCCCATGATGAGGATCATCATCCAATTTCTTCGTCGTCACCGTCACCGTTATCATCATCAGCAAGATTTCAGAGTCATCATCAGAAAGGGGAAACTTCGACGATGGTTTTTGATTTGGATCCCTCTTTGCATTACAGGCAGTGA 1515 0.464 MELLMQDVKMHSDDKEEDDEEEDEEGAEIVRGESSHCKNYLSFSTNYATSTRRLLHNHHDPHQNSWLGLHDRHHSPPDAATAIESLNSSPRLGLASAPTANFARNHRKSDLMDLSLGGIGTGKYDEEQGANFHGGGSSSNDVGASIEKEHMFDKIVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFHRGAGESYQHRLYIDWRRRSHHGPPGPDPNLITPFFLHHPNQATTQFSQYSIRWGGRLFSLPSPALPPRQQNHSNMFPLYHHQQQQERHHHHHPWQYQVHHHHHHNATNSRSAGPVYSNLIGQQEVRNVPMIIDSVPVDHYHHSHQNYYHGKNSSAPNNTTAGKTIRLFGVNMECASSSSSSSSPPVEESRCCNVTVMANPSISPSSSIIPPPLHQYLRVPHDEDHHPISSSSPSPLSSSARFQSHHQKGETSTMVFDLDPSLHYRQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0279 504 MobiDBLite consensus disorder prediction 455 504 - -
Lele43g0279 504 FunFam B3 domain-containing protein 145 262 - -
Lele43g0279 504 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 59 422 IPR044800 GO:0003700
Lele43g0279 504 MobiDBLite consensus disorder prediction 467 489 - -
Lele43g0279 504 MobiDBLite consensus disorder prediction 1 27 - -
Lele43g0279 504 ProSiteProfiles B3 DNA-binding domain profile. 152 257 IPR003340 GO:0003677
Lele43g0279 504 MobiDBLite consensus disorder prediction 322 345 - -
Lele43g0279 504 MobiDBLite consensus disorder prediction 321 348 - -
Lele43g0279 504 SMART B3_2 152 257 IPR003340 GO:0003677
Lele43g0279 504 Gene3D - 145 260 IPR015300 -
Lele43g0279 504 CDD B3_DNA 150 239 IPR003340 GO:0003677
Lele43g0279 504 Pfam B3 DNA binding domain 152 256 IPR003340 GO:0003677
Lele43g0279 504 SUPERFAMILY DNA-binding pseudobarrel domain 149 252 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0279 Lele-ChrLele43 2530933 2532447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0279 147 415 RAV Transcription Factor Family AT2G46870 50.542 1.26e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele43g0279 B3 2e-28 CL0405