LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0274	ATGGCTCCTTCCTTGAAGTCCCACTCAGTCCTCGCCAACGGCGAATCAAACCACCACAGGCAATCACTTTCAGGGAACACACAAGAAGACGAAGAGAGCTTCATCTCCGCCATGCAACTCGCGTCCTCCTCTGTTCTCTCCATGTCTCTGCAAGCCGCCTTGGAACTCGGCATCTTTGACGCCATCGCCGGAGCCGGCGAGGACGTAAAGCTCTCTGCAAAGGGTATCGCTGCCTTGGTATCCTGCACCAACCCAGAAGCTCCGACGATGCTTGATCGTCTCCTTAGTCTACTGGCCAGCCACTCTGTTCTTCACTGCTCCGTCGTTGACGATCAACAAGGAACAAAACAGAGGATTTACAGCCTCTCCCCTGTTTCTAAGCACTTCGTCTCAGATTCTAATGGCATTTCTGTGGGAAATCTCCTGTCCCTGATCCAAGACAGAGTTTTCATGGAAAGCTGGAGGGAGTTGAAGGGAGCGATAAAGGAAGGAGGGATAGCATTTAACAGAGTACATGGGATGCATGCGTTTGAGTATCCAAGTAAGGATGCGAGGTTCAACGATGTTTTCAACAAGGCAATGCATGATTCGACGATTCTGATAACGAGCAACATTCTTAAAGTCTACAATGGATTTGAGGCACTCGACAGAGTCGTAGATGTTGGTGGCGGTCTTGGGATTAACCTTGACTTGGTCACTTCCAAGTACCCTCATATACAGGGCATCAATTTTGATCTGCCTCATGTCCTCCAAAATGCCCCTCCCTACCCTCGGGTACAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTCAAGGACAGGCCATTTTTATGAAGTGGATACTGCATGATTGGAGCGATGAACACTGCGTGAAGCTGCTGAAGAATTGCCACAAGGCGATTCCAGAAGATGGAAAATTGATTATAGTGGACATGATTCTACCAGATGAGCCAAACACGAGTTGTGCTCTCAAAAGTGCTCTTCAAGGAGATGTCCTAATGATGGCCCAGAATCCTGGAGGCAAGGAACGAACCCAGGAGGAGTTCCTGGATCTGGCCACTAGCTCCGGGTTCAGCGGGATCCGATTCGTCTGTCGGGTTTGCGGATATTGGGTCATGGAGTTCTACAAGTAA	1134	0.4938	MAPSLKSHSVLANGESNHHRQSLSGNTQEDEESFISAMQLASSSVLSMSLQAALELGIFDAIAGAGEDVKLSAKGIAALVSCTNPEAPTMLDRLLSLLASHSVLHCSVVDDQQGTKQRIYSLSPVSKHFVSDSNGISVGNLLSLIQDRVFMESWRELKGAIKEGGIAFNRVHGMHAFEYPSKDARFNDVFNKAMHDSTILITSNILKVYNGFEALDRVVDVGGGLGINLDLVTSKYPHIQGINFDLPHVLQNAPPYPRVQHVGGDMFESVPQGQAIFMKWILHDWSDEHCVKLLKNCHKAIPEDGKLIIVDMILPDEPNTSCALKSALQGDVLMMAQNPGGKERTQEEFLDLATSSGFSGIRFVCRVCGYWVMEFYK	377

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0274	377	CDD	AdoMet_MTases	217	314	-	-
	Lele43g0274	377	SUPERFAMILY	"Winged helix" DNA-binding domain	28	132	IPR036390	-
	Lele43g0274	377	Gene3D	Vaccinia Virus protein VP39	130	377	IPR029063	-
	Lele43g0274	377	PIRSF	O-mtase	15	377	IPR016461	GO:0008168
	Lele43g0274	377	PANTHER	O-METHYLTRANSFERASE	37	375	IPR016461	GO:0008168
	Lele43g0274	377	FunFam	Caffeic acid O-methyltransferase	130	377	-	-
	Lele43g0274	377	Pfam	Dimerisation domain	48	99	IPR012967	GO:0046983
	Lele43g0274	377	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	136	376	IPR029063	-
	Lele43g0274	377	FunFam	Caffeic acid 3-O-methyltransferase	15	129	-	-
	Lele43g0274	377	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	38	377	IPR016461	GO:0008168

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0274	Lele-ChrLele43	2473733	2475793	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g0274	30	377	Monolignol Biosynthesis Gene Families	AT5G54160	51.724	1.01e-132	382

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