Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0272 ATGGAGAGGCTTCAAGGACCCATCAATTCCGGTTTCTTTGGTGAGCATTTGGGAGTGAACTGCTTCGAGCAAGGTCTGATCGAGAACGAAGATGAAGAAGAACTTTTGATATCAGTATCAAGTTTGGAGGATAAAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAATTTTTCCCCTTCAAAGATTCCAACTTCCAGTTTCAGACACTTATGAACCAGAAGAAACCATGCGGAGAAGAGAGGGAAAAAACGTGCTTATCTAGAATGATAACAGAGAGCCAAGTTCACGCGCCGCTGGAGCGAGAGAGCTGTGTCACCCACGAGACGGCGGAGATGCCATCGTCGCAGTCGCCGGCGAAATCTGAGAACTATAGGAGAAAGAGGAAGAGGACGAGACCAATTAAGAGCAAGGAAGACGTGGAGAATCAACGCCTGACCCACATTGCCGTCGAACGCAACCGCCGCCGACAAATGAACGACCACCTTAGTGTTCTCAAATCACTCATGCCCCCTTCCTATATTCAAAAGGGGGACCAAGCGTCCATAGTTGGAGGTGCAATAGATTTTGTAAAGGAATTAGAGCAACTTCTTCAATCCCTGGAGGCACAGAGAAGAATGAGAAGGAACGATGAGATTGGATTCAGCTATGGAACGACGTCGTCGCGTGGAGAAGAATTTAAAGCAGAGAACAAGTCAGAATTTGCAGAAACAGAAGTAACTGTGATTCAAAACCATGTGAACCTGAAAGTTCGGTGCAAGAGAAGAACAGGGCAGTTAGTGAAGGCCATAATGGAAATTCAGGATCTTAGGTTAACAATTCTGCACCTAAACATAACTTCTTCACAAAACTCTGTTCTCTATTGTTTCAATCTCAAGATAGAAGAAGAGTGTGAAGTAGTGACAGCAAGTGAAATTGCAGGAGCAGTTCAAGAGATGTTTAGGTTCATCAATGGAAGCGGCGAACAGAAGAAGGCAGAGAAACGGGGAGCAGAGGGCACTGCTATTTTGTCTGCATATGAAGCCTATGTGAATTAA 1050 0.4505 MERLQGPINSGFFGEHLGVNCFEQGLIENEDEEELLISVSSLEDKMPFLEMLQSVESQTPQFFPFKDSNFQFQTLMNQKKPCGEEREKTCLSRMITESQVHAPLERESCVTHETAEMPSSQSPAKSENYRRKRKRTRPIKSKEDVENQRLTHIAVERNRRRQMNDHLSVLKSLMPPSYIQKGDQASIVGGAIDFVKELEQLLQSLEAQRRMRRNDEIGFSYGTTSSRGEEFKAENKSEFAETEVTVIQNHVNLKVRCKRRTGQLVKAIMEIQDLRLTILHLNITSSQNSVLYCFNLKIEEECEVVTASEIAGAVQEMFRFINGSGEQKKAEKRGAEGTAILSAYEAYVN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0272 349 Coils Coil 195 215 - -
Lele43g0272 349 Gene3D - 146 218 IPR036638 GO:0046983
Lele43g0272 349 MobiDBLite consensus disorder prediction 111 142 - -
Lele43g0272 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 214 IPR036638 GO:0046983
Lele43g0272 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 198 IPR011598 GO:0046983
Lele43g0272 349 SMART finulus 153 204 IPR011598 GO:0046983
Lele43g0272 349 Pfam Helix-loop-helix DNA-binding domain 148 199 IPR011598 GO:0046983
Lele43g0272 349 CDD bHLH_AtFAMA_like 150 223 - -
Lele43g0272 349 PANTHER MAX DIMERIZATION, MAD 107 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0272 Lele-ChrLele43 2456975 2459070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0272 37 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 46.405 1.03e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele43g0272 HLH 1.1e-10 No_clan