Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0269 ATGCGTGAAGCGGTTCTGGCTAGCGGTAGAAAGGGGATGGAGGTGAGGTTGGAGGTAGAAGAAGACATGAACATGATGAACCAGCTGAAGGATGAGAGCTCCACAGAAATGGATAAGTGGGACAAGCTTCTTCCTCAGATGGTGCTCAGAGTTCTGCTGGTGGAAGCTGATGATTCTACTCGCCAGATTATCACAGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAACATTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGAAGTGGAGCTGCCGTCAATATCTGGATTTGCGCTTCTTACTTTAATCAAGGAGCATGAAATTTTGATGTCTTCTCATGATTCTATTTGCATGGCAATGAAATGCATATTAAAAGGTGCATCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTACTATCAACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAGACAATGCTGCCAGCAATCATTCAACTGGTTCTGTGGCCTCCACACAGAAAAATAATGAATGCTGCGAGATAAGGAGTGTAGCCCAAAGCACTTGTACATCGCCTATTTTGGAAGTTGAGAGTGCATACGTGCAAAATATGCAGGATACGTCCCAGCCCAGGAGTTCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAGTCTGCAAAACTTGAAGGGGACTCCGCCAAACATAATAATGGAACTACTAAGCAAGGCAGTTGTGCTGAAACAGAAAATCAGGATCAATCTTTAAGAGCAGAGTTAAGTAGAGACAATGCTAGTGTTGGTACAGAGATTGATGGCTGCAAGGATGAATTGGTAGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATATTCCAAGGAACGCTGATGAGAATTATAGTCTTGCTGATGATGGGAGAGACAAGTTTGATTTTGATCCGCAGTTGGAACTTTCCTTGAGAAATTTTTCTGGTAGCTCATGTAAACAAGAACCTGAGGAAAGGCAAACACTGAAACATTCAAATGCGTCTGCCTTTTCTTGGTATAGTGGCAATAAGTTGCCACAGCCCCTTTTTCCATCATTAGCGATGAGTTCTGCCAAAGCATATAGCACTGAGATGAATTCCCAGAATTCTAATGAAATATCTGGAATTGATAGTTCTTATCAGTGTGGTAGAACAAATCATACTCAGGAGAATACAACCCCACTGGTTCTTCACCAGTCTGGACAAGCTGGGGTACAAATGCCAAACGTTCATCCTGGATCCTCTCCTGCTACTGGTGTTACTTCTGATCATATGTTTAGTGGAAATGTGAAGGTTGTGCCTTCTATATTCTTCACACAATCCAGTGCTCATGCCATGTGGAGTCCCAAATCAGTCGGCGGGAGAGAGAATTCTCCCTCTCCCCCAACCACTTCATTCCTGTTAAATGCTGAAAGTCACAACTCAGAACAATATTATCAATGGTCTGATGCCAGTTGTGCTCCTCTTGATAAAAAGACACGGCGTGATAAAAGCTACTTGGATCCTGCAATGCATGATTATCGAGGTGCTTACCAGAATACCAGTATTAGTTTATGCCCTGACACTCCGAACCACATTAATGATGGTTCACATGGAAGTATAGGCCGTATTAGAGATGTAGATCATACTTCGGCTGTGGTAATTGAGAAAACCCCTGAAAGCTTTAGCAGCAACAGTTACCAAGATTATGACAAATACAGAGGGGCGGATTCTCTGCATCCGAGCCAAAGGGAAGCTGCTCTAACAAAGTTTAGACTGAAGAGGAAAGACAGATGCTATGATAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCACCTGTTGATTCTGGTGGTGGTTCCTGA 1989 0.4299 MREAVLASGRKGMEVRLEVEEDMNMMNQLKDESSTEMDKWDKLLPQMVLRVLLVEADDSTRQIITALLRKCSYRVAAVSDGLKAWETLKKKAPDIDLILTEVELPSISGFALLTLIKEHEILMSSHDSICMAMKCILKGASDFLIKPVRRNVLSTLWQHVWRRHPKKLEATSEDNAASNHSTGSVASTQKNNECCEIRSVAQSTCTSPILEVESAYVQNMQDTSQPRSSSNLSNIDTVKYEESAKLEGDSAKHNNGTTKQGSCAETENQDQSLRAELSRDNASVGTEIDGCKDELVEPSRGAIDLIATFENIPRNADENYSLADDGRDKFDFDPQLELSLRNFSGSSCKQEPEERQTLKHSNASAFSWYSGNKLPQPLFPSLAMSSAKAYSTEMNSQNSNEISGIDSSYQCGRTNHTQENTTPLVLHQSGQAGVQMPNVHPGSSPATGVTSDHMFSGNVKVVPSIFFTQSSAHAMWSPKSVGGRENSPSPPTTSFLLNAESHNSEQYYQWSDASCAPLDKKTRRDKSYLDPAMHDYRGAYQNTSISLCPDTPNHINDGSHGSIGRIRDVDHTSAVVIEKTPESFSSNSYQDYDKYRGADSLHPSQREAALTKFRLKRKDRCYDKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPPVDSGGGS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0269 662 MobiDBLite consensus disorder prediction 250 279 - -
Lele43g0269 662 ProSiteProfiles CCT domain profile. 606 648 IPR010402 GO:0005515
Lele43g0269 662 MobiDBLite consensus disorder prediction 245 286 - -
Lele43g0269 662 Gene3D - 47 245 - -
Lele43g0269 662 MobiDBLite consensus disorder prediction 476 496 - -
Lele43g0269 662 MobiDBLite consensus disorder prediction 632 662 - -
Lele43g0269 662 PANTHER TWO-COMPONENT RESPONSE REGULATOR 49 349 IPR045279 GO:0009736
Lele43g0269 662 Pfam CCT motif 606 648 IPR010402 GO:0005515
Lele43g0269 662 Pfam Response regulator receiver domain 51 154 IPR001789 GO:0000160
Lele43g0269 662 SUPERFAMILY CheY-like 49 169 IPR011006 -
Lele43g0269 662 SMART REC_2 49 157 IPR001789 GO:0000160
Lele43g0269 662 ProSiteProfiles Response regulatory domain profile. 50 161 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0269 Lele-ChrLele43 2440154 2444296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0269 605 655 Response Regulator Gene Family AT5G24470 84.314 7.68e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele43g0269 Response_reg 7.4e-18 CL0304