Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0264 ATGGTGGGTAGTGCTAATAATCCTCCTGGGCATTACAATGACACAACTTTTACTAAAATCTTTGTTGGTGGATTGGCTTGGGAGACTCAAAGGGACACAATGAGGAGATATTTTGAGCAGTTTGGTGAGATCCTTGAGGCTGTTGTTATTACAGACAAGAACACAGGGAGATCCAAGGGTTATGGCTTTGTTACATTTAAGGATCCAGAAGCAGTCATGAGAGCATGTCAGAATCCATCTCCGGTTATTGATGGGAGAAGAGCAAACTGCAATCTTGCATCTCTTGGAGCAAACAAGAATCGCCCACCAACACCTCAACATGGAAGGTTCAGACCAGGACCTGGACTGGTGGCTAACCCTGCAGCTGCATACCATGGCTCTTCTTCTACATTTTTCCATCAGCCCTCCGGCCAATATACATTTCCTTATTCAACTTATGGGTATTCTGGATACTCACATGACACCATGTATCCCATGAACTATTATACTGTGTATGGAGGTCAACTGTTTTCTCCATATTACCCTTCAAGTGGGGCATCTGGGCCACCAGGACTGGTCCATAATATTTACCCTTTCTATGCTCAATATGCTCAGACTAGTAGCCGAGCTCAAGGTTTTGGACTTCAATATCCTCATCAAATGCTACAGTTCCCATATCTGCCTCATCAGCAGCACTATGGCTCCACTGGGATCCTCTCTTTTCCTCCTTCTTCAATGCCATTGTCAACTACAACTAGTGCAGGTTACCAGCTCTTCTACTGCAAAATATCATAA 774 0.4419 MVGSANNPPGHYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAVMRACQNPSPVIDGRRANCNLASLGANKNRPPTPQHGRFRPGPGLVANPAAAYHGSSSTFFHQPSGQYTFPYSTYGYSGYSHDTMYPMNYYTVYGGQLFSPYYPSSGASGPPGLVHNIYPFYAQYAQTSSRAQGFGLQYPHQMLQFPYLPHQQHYGSTGILSFPPSSMPLSTTTSAGYQLFYCKIS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0264 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Lele43g0264 257 CDD RRM_RBM24_RBM38_like 18 93 - -
Lele43g0264 257 SUPERFAMILY RNA-binding domain, RBD 10 113 IPR035979 GO:0003676
Lele43g0264 257 SMART rrm1_1 19 91 IPR000504 GO:0003723
Lele43g0264 257 Gene3D - 3 109 IPR012677 -
Lele43g0264 257 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 12 99 - -
Lele43g0264 257 PANTHER BOULE-RELATED 10 236 IPR037366 -
Lele43g0264 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0264 Lele-ChrLele43 2394510 2395914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0264 14 94 C2H2 Transcription Factor Family AT2G19380 43.210 9.99e-16 74.7