Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0260 ATGCAGGAGAACATGAGCATCTCCGTGAATGGACAATCCCAGGTTCCTCCTGGTTTTCGCTTCCATCCAACCGAAGAGGAGCTTTTGCAGTACTACCTCAGAAAGAAGGTTTGCTACGAGAAGATCGACCTCGACGTTATTCGCGATGTCGATCTCAACAAGCTCGAGCCATGGGATATACAAGAGAAGTGCAAAATAGGAACCACCCCACAGAACGATTGGTACTTCTTCAGCCATAAAGACAAGAAGTATCCCACCGGAACTCGTACCAACCGGGCCACGGCTGCCGGATTCTGGAAGGCTACAGGGCGGGATAAGGTGATATACGGCAACGGACAGAGGATTGGGATGAGAAAGACCCTGGTTTTCTACAAAGGACGTGCCCCTCATGGGCAAAAGTCTGATTGGATCATGCATGAGTATAGGCTTGAAGATAACATCATCAACACCGAGACCAGCATTGTGACGAATGTAATAGGAGATGGAGCACAGGAAGAAGGGTGGGTGATTTGCAGGATATTCAAGAAGAAGAACCATCTCAAAACCCTAGAGAGTCCCTTGGCTTCGTCCATTACAGAGGAAACACTCAGAGGCCACGACCACGACTCCATGTTTGATCCTTGTGATGACGACGAGGGAGCTCTGGAGGAAATTCTTGGGCAAATGGGAAGAAGCTGTTGCAAAGAAGAAGAAGAACAGAATGACCCCACCAACAACAACCGAAGAATCACCAGACCGTTTGACGACACTGTCATGAACAACAACAACAACAATGGTTACTTCCACCATGACAGGTTCTTGAAGCTTCCTCGCTTAGAAAGCCCAAAATATAATAATTACGGGTACCACCCTATTATTGAAGGAGCATATGGCGGCGGCGACCACAGCTTTGTTCATCATCAGATGGAATCAGCAACTTCATCTGTTAATGGTGGTCTTATCACCAACTGGGAAGCACTGGATCGGCTCGTAGCTTCGCAGTTGAATGGCCAAACGGAGACTCGCCGGAGCCTACCTTGCTTCAATAATAATACCACCGGAGAGCCCATCACCACCATGGGCTATGGCTTGAGCGAGCATGATCGGCAACTTCTTCCGACCTTACGATCTCCGTCACTTTCATCAATAACAGCATCATCAGCCACCCACAACAACAGTGTAGCTAATTACGATTACACCAACGAGATTGACCTCTGGAACTTTGCTCGATCCGCATCATCGTTAGTGTCAGGCTCCGAACCACTATGCCACGTGTCCAACACATCCTCGGTGTAG 1275 0.4855 MQENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYGNGQRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDNIINTETSIVTNVIGDGAQEEGWVICRIFKKKNHLKTLESPLASSITEETLRGHDHDSMFDPCDDDEGALEEILGQMGRSCCKEEEEQNDPTNNNRRITRPFDDTVMNNNNNNGYFHHDRFLKLPRLESPKYNNYGYHPIIEGAYGGGDHSFVHHQMESATSSVNGGLITNWEALDRLVASQLNGQTETRRSLPCFNNNTTGEPITTMGYGLSEHDRQLLPTLRSPSLSSITASSATHNNSVANYDYTNEIDLWNFARSASSLVSGSEPLCHVSNTSSV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0260 424 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
Lele43g0260 424 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 254 - -
Lele43g0260 424 FunFam NAC domain-containing protein 24 180 - -
Lele43g0260 424 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Lele43g0260 424 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Lele43g0260 424 MobiDBLite consensus disorder prediction 230 249 - -
Lele43g0260 424 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0260 Lele-ChrLele43 2354835 2356321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0260 1 422 NAC Transcription Factor Family AT2G46770 53.412 7.04e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele43g0260 NAM 7.8e-36 No_clan