Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0259 ATGGGGAAGAAGGGAGGTACCTCTTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACCCTGACAGAAGGGACCAAGAAGAAGACGAAGACAAGAAGAGAGAAAAACGACGATGGATTTTCAGAAAAACAGTGAATCAGGACGCCTCGGTGAGTATCCAGCACACCCCGACAAAGCAGAACCCTGATTCGGCGGCCACAACTGCCAGTCGTGTACCTGTGCCGACGGCGACGGCGTCGGTGACAGATCAGAACAATGCGCTTGCCTTGGCGGTAGCGAAGGCTGAGGCGGCCAGGTTCACCGCTCAGGCAGCGGTGGAAGCTGCTAGATTGAAGAGGCCTTCGAATCTAGCCACGGAGCACTATGCTGCTACGGTGATTCAAACTGCTTTCAGAGGATACCTTGCAAGGAGGGCACTTCGAGCTCTGAAAGGGCTGGTGAAATTGCAAGCCTTGGTGAGGGGTCATAATGTTCGGAAGCAGGCAAAAATGACCCTTCGGTGTATGCAGGCTTTGGTTCGAGTGCAAGCCAGAGTGCTTGACCAGCGCTCGAGGTTCTCGCACGAGACCATTAGTAGAAAATCCACATTCAGTGACACCAACAGCGTTTGGGAGTCGCGTTATCTTCAGGATATTTCAGATAGGAGATCAATGTCAAGAGAAGGAAGCAGTATTGCAGACGACTGGGATGAACGCCCACACACAGTTGAGGAAGTTAAAGCCATGTTGCAGCGGAGGAAAGAAGCAGCAGCTATGAAGCGTGACAAGTCATTGTCTCAAGCTTTCTCGCAACAGCTTTCGAGAAATGGTTGTAATTCATCGATTGGAAATGAAGAGGAGCTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGAGGGAGACAAGAGGAAGAGCTTCGACTGATCAGAGAGACACCATTAAAACTGTAGAAATTGATACTTCTCAGCCTTACTCATATATGGGATCTAACTACAGAAGATCACATCCAAATTATCAATATAACCCACACCAAACCCAGAGACATTCAGTGGCTTCCCCACTTCACAGAAGCCACCAACATAGTTCTCTTCATCAATCTCCTGCAACCCCATCTCCTGCAAAATCAAGGCCTATCCAAGTCCGGTCCGCGAGCCCTCGATGCAGTAGGGAAGATAGAAGCTACAATACATCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATTCTGGAAGCATGTACCAAAATGGGAGGGTTGGAACAAGCAGCATCAGTGGTGGGGGTACATTGCCTCATTACATGGCGGCAACTGAGTCTGCAAAGGCCCGGGTTCGGTCTCAGAGTGCACCGAGGCAGAGGCCATTGACACCGGAGAGGGACAGAGTAGGATCAGTAGCAAAGAAGAGGCTTTCATTCCCTAATGCTCCAGACCCTTATGCAGTTGCAATGGGTTATGGAAATTATGGGCATAGTTTAAGAAGTCCAAGCTTCAAGAGTGTGAATGCTTTACACTTCGGGTTGGAGCAGCAATCCAACTATTCTTCTTGCTACACTGAGAGTCTTGGTGGCGAGATTTCTCCATCTTCAACTAGTGATCTTAGAAGGTGGTTGAGATGA 1623 0.4929 MGKKGGTSWLTAVKRAFRSPTKDPDRRDQEEDEDKKREKRRWIFRKTVNQDASVSIQHTPTKQNPDSAATTASRVPVPTATASVTDQNNALALAVAKAEAARFTAQAAVEAARLKRPSNLATEHYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRSRFSHETISRKSTFSDTNSVWESRYLQDISDRRSMSREGSSIADDWDERPHTVEEVKAMLQRRKEAAAMKRDKSLSQAFSQQLSRNGCNSSIGNEEELEERPKWLDRWMASKPWERETRGRASTDQRDTIKTVEIDTSQPYSYMGSNYRRSHPNYQYNPHQTQRHSVASPLHRSHQHSSLHQSPATPSPAKSRPIQVRSASPRCSREDRSYNTSQTPSLRSNYHYSGSMYQNGRVGTSSISGGGTLPHYMAATESAKARVRSQSAPRQRPLTPERDRVGSVAKKRLSFPNAPDPYAVAMGYGNYGHSLRSPSFKSVNALHFGLEQQSNYSSCYTESLGGEISPSSTSDLRRWLR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0259 540 PANTHER IQ-DOMAIN 5-RELATED 1 476 - -
Lele43g0259 540 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Lele43g0259 540 MobiDBLite consensus disorder prediction 319 385 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 1 82 - -
Lele43g0259 540 Pfam IQ calmodulin-binding motif 150 166 IPR000048 GO:0005515
Lele43g0259 540 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Lele43g0259 540 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Lele43g0259 540 MobiDBLite consensus disorder prediction 520 540 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 440 466 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 301 318 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 261 286 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 392 411 - -
Lele43g0259 540 FunFam IQ-domain 11 122 173 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 48 82 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 18 46 - -
Lele43g0259 540 MobiDBLite consensus disorder prediction 261 279 - -
Lele43g0259 540 SMART iq_5 145 166 IPR000048 GO:0005515
Lele43g0259 540 SMART iq_5 122 144 IPR000048 GO:0005515
Lele43g0259 540 MobiDBLite consensus disorder prediction 301 411 - -
Lele43g0259 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 167 IPR027417 -
Lele43g0259 540 Pfam Protein of unknown function (DUF4005) 387 489 IPR025064 -
Lele43g0259 540 Gene3D - 122 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0259 Lele-ChrLele43 2333259 2335388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0259 9 540 IQD Protein Family AT4G00820 58.942 0.0 518