Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0246 ATGGGCCAGTGCTACGGCAAGACCAATCCCGCCGTTGAAAATGACGGTGCCGCAAATACAACCACTATTATCGCCGATTCCGGTGGCCAGCCGCAGTCGCCGCTGCCGTCAGTGAGCGGTGCCAACGGGTTTCCGTCGGGGAAGAACACACCTGCCCGGTCGTCCAACGCGAGCCCATGGCCAAGCCCGTACCCGCAAGGTGTCAACGCGAGCCCGTTTCCCGGGGGGGTGTCACCCTCGCCGGCGAGGACGTCTACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCGCCGGCGAAGCATATAAGAGCGTCGCTGGCAAAGCGGCTTGGTCATGTGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGCGGGACGGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGATATAGTAAGAATTTTGGAGCTAAGTATGAGCTAGGAAAGGAAGTGGGAAGGGGCCATTTTGGTCATACGTGCTCTGCATGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGCGAAGATGACAACAGCAATAGCAATTGAAGATGTTCGGAGAGAGGTGAAGATGTTAAAAGCTCTATCTGGCCATAAGCATCTTGTCAAGTATCATGATGCTTGTGAGGATGCGAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGGAGATATACTGAGGAGGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTATTGTCGCATTTTGTCATCTTCAAGGTGTTGTGCACCGTGATCTAAAACCTGAGAATTTTCTGTTCACTTCACGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTTTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCGCCTGAGGTTCTTCACAGATCCTATAGTATGGAAGCAGATATATGGAGTATAGGTGTTATCACTTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCTGGAATATTTCGTGCAGTGCTTAGAGCTGATCCAAATTTTGATGATTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTGTTGAACAAGGACTACAGGAAAAGAATGACTGCAGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGACAACCGTCCTATACCTTTAGATATATTAGTTTACAAATTATTGAAGTCTTATCTCCATGCAACACCATTCAAACGAGCAGCACTAAAGGCCCTTGCAAAAGCCTTGTCAGAAGATCAATTGGTGTATCTCAGAGCACAATTCAGATTGTTAGAACCAAACAAAGACGACTATGTCTCCCTTGACAACTTCAAAATGGCTCTTGTACGTAATTCAACAGATGCCATGAGGGAGTCAAGGGTTCTAGATATTATACATTCGATGGAACCGCTTGCCTATAGGAAGATGGACTTTGGAGAATTTTGTGCAGCCGCAATCAGCACATACCAATTAGAGGCACTTGACACGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTCGAGAGGGAGGGCAACCGTGTGATAACAGTTGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCGGCTTATTCGATTATCAGAGATTGGATACGAAATACTGATGGAAAGCTTAGTTTAATTGGATACACAAAATTTTTGCATGGTGTCACACTGCGTAGTTCAAATACAAGACACCATTAG 1803 0.4681 MGQCYGKTNPAVENDGAANTTTIIADSGGQPQSPLPSVSGANGFPSGKNTPARSSNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHVKPKEGPIPEDRGTEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSAWGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSIVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSMEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLLKSYLHATPFKRAALKALAKALSEDQLVYLRAQFRLLEPNKDDYVSLDNFKMALVRNSTDAMRESRVLDIIHSMEPLAYRKMDFGEFCAAAISTYQLEALDTWEHIASTAFEHFEREGNRVITVEELARELNLGPSAYSIIRDWIRNTDGKLSLIGYTKFLHGVTLRSSNTRHH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0246 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 575 - -
Lele43g0246 600 Pfam Protein kinase domain 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0246 600 MobiDBLite consensus disorder prediction 1 101 - -
Lele43g0246 600 FunFam CDPK-related kinase 1 446 518 - -
Lele43g0246 600 Gene3D - 418 591 - -
Lele43g0246 600 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Lele43g0246 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele43g0246 600 FunFam CDPK-related kinase 3 140 312 - -
Lele43g0246 600 MobiDBLite consensus disorder prediction 13 64 - -
Lele43g0246 600 SUPERFAMILY EF-hand 436 589 IPR011992 -
Lele43g0246 600 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0246 600 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0246 600 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Lele43g0246 600 SUPERFAMILY Protein kinase-like (PK-like) 147 433 IPR011009 -
Lele43g0246 600 FunFam CDPK-related kinase 1 141 236 - -
Lele43g0246 600 Gene3D Transferase(Phosphotransferase) domain 1 237 417 - -
Lele43g0246 600 CDD STKc_CAMK 147 409 - -
Lele43g0246 600 FunFam Calcium-dependent protein kinase SK5 320 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0246 Lele-ChrLele43 2195999 2203377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0246 1 594 EF-hand Containing Proteins AT3G50530 58.703 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele43g0246 Pkinase 8.7e-68 CL0016