Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0235 ATGATTGTTTACAGCTCAGTTTGGTTCATTCTTCTTCTAACAGTACTGGTTTTTCTTACGTTCTTCTTCCTTCAGGTGATTCTGTTCAAAACTGGATTCATCTATACTCTGAAGAAACTATGGAGAACCGTTGAGGATTACTTTCATGTTTACCAGTTCTTCAAAGTTCCAGAGCTCAACGAGAGCTTGAAGGAGAATCAGCTTTACAAGAAGGTCTCTCTCTATCTGCATTCTCTGCCTTCCCTTGAAGACTCTGATTTCACCAACTTCGTCACTTCCTCAGGGAAGAAGCAGAACGACATCGTTCTCCGCCTCGACCCCAAACAAACCATCGGCGACGAATTTCTTGGAGCCAGAGTGTTCTGGTTCCACGAAGCAGAACAAACACCTGAGTCAAAAAACAGAGCGTTCGTGCTGAAAATCAGAAAAGCCGACAAGAGAAGAATTCTCCGGCCTTATCTCCAGCACATCCACACCGTTGCCGATGAAATAGAGCAACAAGTAAAACGTGATTTGAAGCTGTACATGAATGCTGGCTCCCAATACATAGGCGGCGACGGGAATGTCCGGTGGAGATCCGTTCCGTTCATGCATCCATCAACCTTGGATACCATCGCCATGGAAACCGATCTGAAGAACAAGATAAAATCCGACCTCGAATCTTTCCTCAAAGCTAAACAGTACTACCAACGATTGGGTCGGGTATGGAAACGGAGCTTCCTTTTGTATGGACCATCCGGCACTGGAAAATCGAGCTTTGTCGCTGCCTTGGCCAATTTCCTCAATTACGATGTATACGACATCGACCTTTCAAACGTCCCTGGAGATTCCGATTTGAAGCTGCTGCTGCTGGAAACGACGCCGAAATCGATCATCGTACTCGAAGACCTCGATCGGTTCCTGATGGAGAAGAAATCGACGGGTGTGAGTTTGTCGGGAGTATTAAACTTTATGGACGGGATTTTGAACTCGTGCTGCGCAGAGGAGAGAGTCATGATTTTCACGATGACCAGTAAGGATCAAATCGACCCGAACCTACTCCGACCGAGTCGTGTCGACGTCCATATCCATTTCCCGCTCTGTGATTTTGCATCATTCAAGACGCTCGCCAGCAGCTATCTCGGTGTGAAGGACCACAAGCTCTTCCCACAGGTTCAAGAGATTTTTGAAAACGGTGCGAGTTTGAGCCCCGCCGAGATAGGCGAGTTAATGATCGCGAATCGGACCTCACCCAGTCGGGCCATTAAGTCGGTGATCAGCGCGCTGCAAACGGACGGCGATGGAAGGGGAGGCGGGAAGATCGGGCGGCGATCGGGGGAGAGCAACGACGCCAAGGAATTGGAACAACGGGGTTCTCAGTCTCCGTATAGAGAGGGTCTCTCGACGGTGAAGGATTTACGGAAACTGTACGGTTTGTTCAGAGTAAAGGGCAACGCGAAATCTCAGTCGTTCGATGGTGGTGCAAGTCCCAGGTCAGACCGATGA 1485 0.4889 MIVYSSVWFILLLTVLVFLTFFFLQVILFKTGFIYTLKKLWRTVEDYFHVYQFFKVPELNESLKENQLYKKVSLYLHSLPSLEDSDFTNFVTSSGKKQNDIVLRLDPKQTIGDEFLGARVFWFHEAEQTPESKNRAFVLKIRKADKRRILRPYLQHIHTVADEIEQQVKRDLKLYMNAGSQYIGGDGNVRWRSVPFMHPSTLDTIAMETDLKNKIKSDLESFLKAKQYYQRLGRVWKRSFLLYGPSGTGKSSFVAALANFLNYDVYDIDLSNVPGDSDLKLLLLETTPKSIIVLEDLDRFLMEKKSTGVSLSGVLNFMDGILNSCCAEERVMIFTMTSKDQIDPNLLRPSRVDVHIHFPLCDFASFKTLASSYLGVKDHKLFPQVQEIFENGASLSPAEIGELMIANRTSPSRAIKSVISALQTDGDGRGGGKIGRRSGESNDAKELEQRGSQSPYREGLSTVKDLRKLYGLFRVKGNAKSQSFDGGASPRSDR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0235 494 Pfam Domain associated at C-terminal with AAA 37 124 IPR025753 -
Lele43g0235 494 Gene3D - 191 373 IPR027417 -
Lele43g0235 494 MobiDBLite consensus disorder prediction 424 460 - -
Lele43g0235 494 PANTHER BCS1 AAA-TYPE ATPASE 44 427 - -
Lele43g0235 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 420 IPR027417 -
Lele43g0235 494 SMART AAA_5 236 362 IPR003593 -
Lele43g0235 494 Pfam ATPase family associated with various cellular activities (AAA) 241 360 IPR003959 GO:0005524|GO:0016887
Lele43g0235 494 MobiDBLite consensus disorder prediction 430 452 - -
Lele43g0235 494 CDD AAA 237 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0235 Lele-ChrLele43 2090594 2092078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0235 232 358 Calmodulin-binding Proteins AT3G56690 29.078 2.08e-07 52.0