Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0229 ATGTTGCCAACAGATGCGGGAAAAAGAGAAGTCAAAGGCTCGTACCGTCGTACTCGAGGGTTTTCTCATGGAATCTCAGGACTTCTTCGTCTTTGCTTTGTTTCCAAGCTACATACTTTGATGTCTTCTGCTTCTTCTAATGCCTACAACTCACCTTCTTTTCCATACGAGATGAAAACTTCAATAATGGAAGATAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGCTTGAGAGAATACAGCGTTAAACTCGAAAAGGGTTTGAATACCTCCGAGGTTGAGAAACGGCGCGAGAGATATGGTTGGAACGAGTTAGCAAAAGAGAAAGGGAAGCCCTTATGGCAACTAGTATTAGAGCAATTTGATGACATACTTGTGAAGATTCTTCTGGTTGCGGCTTTTATATCATTCATTCTGGCTTATTTACATGGAAGTGAATCAGGAGAATCTGGATTTGAAGCTTATGTGGAGCCACTTGTGATAATTTTGATTTTAGTACTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAACGCTGAGAAGGCACTTGATGCTCTCAAAGAGTTGCAGTGTGAATCAGGAAAAGTGTTAAGAGATGGGCATTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATATTGTGGAATTGCATGTAGGAGACAAAGTGCCTGCTGATATGAGAGTTACGGCTTTGAGAACCTCGACATTGAGAGTTGAACAAAGCTCTTTAACTGGTGAAGCAATGCCTGTTTTGAAAGGCACAAATCCTATTTTCATGGATGATTGTGAGTTGCAGGCCAAAGAAAATATGGTTTTCGCAGGCACCACTGTTGTCAATGGGAGCTGTCTCTGTATTGTTATCACCACTGGAATGAACACCGAAATCGGAAAGATACAGAAGCAAATTCATGATGCTTCTTTGGAGGATAGTGACACCCCATTGAAGAAGAAGCTTGATGAGTTTGGTGGGCAACTTACTACTGCAATTGGGCTGGTTTGCCTTGTTGTGTGGATTATAAACTACAAAAATTTCCTTTCTTGGGAGCTTGTGGATGGATGGCCTTCAAACATCAAATTTTCTTTTGAGAAGTGTACCTATTATTTTAAAATTGCCGTTGCCTTGGCTGTAGCTGCAATCCCTGAGGGCCTTCCCACTGTAATCACGACTTGTTTAGCCCTCGGTACGAGGAAAATGGCTCAAAAGAATGCGATTGTAAGAAAGCTTCCGAGCGTCGAAACTCTGGGATGTACAACTGCTATTTGTTCAGATAAAACTGGTACTTTGACAACAAATCAGATGTCTGTGACAGAGTTCTTTACTTTGGGAGGAAAAACCACTGCTTCTCGAGTCATACACGTTAAAGGCTCAACTTATAATCCTAGAGATGGAGGAATTGTGGATTGGACTTGCTATAACATGGATGCCAACTTGCAGGCCATGGCTGAAATATGTGCCATTTGTAATGATGCTGGGATTCATTTTGATGGTCGTCTTTTCCGGGCTACAGGTTTTCCCACTGAAGCAGCTCTCAAGGTTTTAGTTGAAAAGATGGGAGTTCCAGATAACAAGGAAAGAAACAGAATTCGGGATACAGAAGTTGCTGCAAGCAACTTGATTGATAGCAACACTGAAGTTGGGGCTGTTGAGAGTCTACTTGAACGTAGTTCATATGTGCAACTAGCTGATGGATCCCTGGTTCCTATTGATGAGCAATGTAGGGAACTACTGTTTTCAAGACTCCTGGAGATGAGTTCAAAAGGATTGCGGTGCTTGGGTTTTGCGTATAAGGATGACTTGGGTGAATTTTCAGACTATTATACTGAAAATCATCCTGCTCACAAGAAATTGCTTGATCCTACTTGCTACTCATCTATTGAAAGTGATCTAGTATTTGTTGGTGTTGTTGGTTTAAGAGATCCTCCTCGTGAGGAAGTTCATAAGGCGATCAAGGATTGCAAGGAAGCTGGTATTAGAGTTATGGTGATAACTGGAGATAACAGGTCCACGGCGGAAGCTGTTTGCCGGGAAATTAATCTGTTCTCCAGAGATGAGGATCTTACAGAGAGAAGTCTGACAGGCAAGGAGTTCATGTCTCTTTCTCCTTCAGAACAAGTTAAAATGTTGTCAAGATCTGGAAGCAAGGTATTCTCTCGAGCCGAGCCTAGACACAAGCAAGAGATTGTGAGGTTACTGAAGGATATGGGAGAGATCGTTGCAATGACTGGAGATGGTGTGAATGATGCTCCTGCTCTTAAACTTGCTGACATAGGCATTGCCATGGGCATAACTGGAACTGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAACTTCAGTACCATTGTTTCAGCTGTTTCTGAGGGTCGCTCTATTTACAATAACATGAAAGCCTTTATTAGATACATGATATCATCCAATGTTGGAGAAGTGATATCTATATTTCTGACCGCTGCCCTGCGGATCCCAGAATGTATGATACCTGTGCAACTTCTGTGGGTGAATTTGGTTACTGACGGTCCTCCTGCAACAGCTCTGGGTTTTAACCCAGCCGATGTTGATATCATGCGGAAGCCACCTCGTAAAGCCGATGAACCTCTCATCAGTTCATGGGTTCTTTTCCGTTATCTGGTAAACAATGCTCAAGTAATTGGTTCCTATGTGGGGATTGCAACAGTGGGAGTTTTTGTCTTGTGGTACACGCAAGCATCTTTTCTCGGCATAGATCTGGCCAGTGATGGGCATACAATCATAGAATTTTCGCAGCTTCGCAACTGGGGAGAGTGTCGTTCATGGTCAAATTTTTCTGCTTCTCCATTTACAGTAAGTCGGGGTCGCCTGATCACATTCTCAAATCCATGTGATTACTTTTCAGTTGGCAAAGTGAAGGCTATGACCCTGTCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTCAATGCTTTATCTGAAGAAAACAGCTTGTATGAAATGCCACCATGGAGAAACCCTTGGCTTTTGGTGGCCACAACAATATCGCTTGGACTCCATTGTCTCATCCTTTATGTTCCATTCCTTGCAGAAGTGTTTGGTGTTGTTCCACTAAGTCTCAAAGAATGGTTTTTGGTGATCCTAGTTTCTTTACCTGTAATTTTTGTTGATGAGCTTCTGAAATTAGTGGCAAGGAGGAGTAGGACAGTGAGAAAGGAGAAAACAGCATGA 3228 0.426 MLPTDAGKREVKGSYRRTRGFSHGISGLLRLCFVSKLHTLMSSASSNAYNSPSFPYEMKTSIMEDKPFPAWSWSVEQCLREYSVKLEKGLNTSEVEKRRERYGWNELAKEKGKPLWQLVLEQFDDILVKILLVAAFISFILAYLHGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALDALKELQCESGKVLRDGHFVPDLPARELVPGDIVELHVGDKVPADMRVTALRTSTLRVEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCLCIVITTGMNTEIGKIQKQIHDASLEDSDTPLKKKLDEFGGQLTTAIGLVCLVVWIINYKNFLSWELVDGWPSNIKFSFEKCTYYFKIAVALAVAAIPEGLPTVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTAICSDKTGTLTTNQMSVTEFFTLGGKTTASRVIHVKGSTYNPRDGGIVDWTCYNMDANLQAMAEICAICNDAGIHFDGRLFRATGFPTEAALKVLVEKMGVPDNKERNRIRDTEVAASNLIDSNTEVGAVESLLERSSYVQLADGSLVPIDEQCRELLFSRLLEMSSKGLRCLGFAYKDDLGEFSDYYTENHPAHKKLLDPTCYSSIESDLVFVGVVGLRDPPREEVHKAIKDCKEAGIRVMVITGDNRSTAEAVCREINLFSRDEDLTERSLTGKEFMSLSPSEQVKMLSRSGSKVFSRAEPRHKQEIVRLLKDMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVSEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALRIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRKADEPLISSWVLFRYLVNNAQVIGSYVGIATVGVFVLWYTQASFLGIDLASDGHTIIEFSQLRNWGECRSWSNFSASPFTVSRGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSFNALSEENSLYEMPPWRNPWLLVATTISLGLHCLILYVPFLAEVFGVVPLSLKEWFLVILVSLPVIFVDELLKLVARRSRTVRKEKTA 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0229 1075 Pfam E1-E2 ATPase 192 406 - -
Lele43g0229 1075 PANTHER CALCIUM-TRANSPORTING ATPASE 77 1068 - -
Lele43g0229 1075 SUPERFAMILY Calcium ATPase, transduction domain A 198 306 IPR008250 -
Lele43g0229 1075 FunFam Calcium-transporting P-type ATPase, putative 640 791 - -
Lele43g0229 1075 Gene3D - 121 1064 - -
Lele43g0229 1075 SFLD p-type atpase 407 798 IPR044492 -
Lele43g0229 1075 SFLD C1.7: P-type atpase like 407 798 - -
Lele43g0229 1075 SUPERFAMILY Calcium ATPase, transmembrane domain M 69 1066 IPR023298 -
Lele43g0229 1075 SUPERFAMILY HAD-like 425 850 IPR036412 -
Lele43g0229 1075 PRINTS Sodium/potassium-transporting ATPase signature 547 565 - -
Lele43g0229 1075 PRINTS Sodium/potassium-transporting ATPase signature 1004 1028 - -
Lele43g0229 1075 PRINTS Sodium/potassium-transporting ATPase signature 419 440 - -
Lele43g0229 1075 Pfam Cation transporting ATPase, C-terminus 831 1062 IPR006068 -
Lele43g0229 1075 Pfam haloacid dehalogenase-like hydrolase 423 760 - -
Lele43g0229 1075 Gene3D - 88 310 - -
Lele43g0229 1075 Gene3D - 423 791 IPR023214 -
Lele43g0229 1075 SMART Cation_ATPase_N_a_2 69 143 IPR004014 -
Lele43g0229 1075 FunFam Calcium-transporting ATPase, putative 276 422 - -
Lele43g0229 1075 Gene3D - 436 645 IPR023299 GO:0000166
Lele43g0229 1075 FunFam Calcium-transporting ATPase, putative 173 308 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 746 765 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 770 782 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 660 670 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Lele43g0229 1075 PRINTS P-type cation-transporting ATPase superfamily signature 638 649 - -
Lele43g0229 1075 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 642 IPR023299 GO:0000166
Lele43g0229 1075 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 719 833 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele43g0229 1075 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 364 451 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele43g0229 1075 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 810 1069 - -
Lele43g0229 1075 Pfam Cation transporter/ATPase, N-terminus 71 138 IPR004014 -
Lele43g0229 1075 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0229 Lele-ChrLele43 2063431 2068379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0229 64 1073 Primary Pumps ATPases(2) AT4G00900 73.605 0.0 1589