Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0227 ATGGATTCTGGGGTTGAATCGGCATCGCCAGAAAACGATGGAACAGGGACAAAAGATCCTGCTCGGTTGGATGAGGATTTTGCAGAGAAAGACCCAACTGGCCGATATATCCGGGCAAGGGTGCTTTCAAGACTTTATAGGGCCTTTGATGAAGTTGATGGAATCGAAGTTGCTTGGAACCAAGTTAGGATTGAAGACCTTTTGCAGTCAGTAGTAGACCTAGCAAAACTGTACTCTGAAGTTCACATACTGAAGTCTTTGAAACATGAGAATGTTATGAAGTTCTATCATTCTTGGGTTGACGATAAGAACAAATCTGTTAACATGATCTCCGAGCTCTTCACATCAGGAACTTTAAGACAGTATGTTGTTATGTCAGATTTTCTTGCTTTACTTTTAAGTTGTTCTGCTGTTACATTTGCATCTGAAATAATAGTACGTATTTTGGCTAACAGATACCGTAGGAAGCATAAAAATGTCGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATCCATAGTCAAAACCCTCCAATCATTCATAGAGACTTGAAATGTGACAACATATTTGTGAATGGAAACCATGGAGAAATTAAGATAGGAGACCTAGGCTTGGCGACTGTGATGCAGCAACCAGTTGCTCGAAGTGTAATTGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATACTAGAGATGGTTACTTTTGAGTATCCCTATAGTGAATGCAAAAATCCAGCTCAAATATTTAAAAAAGTTACCACTGGTATCAAGCCTGCTTCTCTTAATAGGGTGAATGACCCCCAAATTAGAGAGTTCATTGAAAAATGTTTGGTTCCAGCATCTGAGAGATTGTCGGCGGAGGAGCTTCTCAAAGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGTCCGAGATCCTTTACAGCTGCCTCCACAAACTCCAATATCTATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGAAATAGATGCTGACTATAACCAGATTTCTGTGAGTACCTTTGCTGAAAGCAACTGTGGAAGCCCTCAGTCTCCAATGCTAGAATTCCAGAGGATATCTGAGGAGAATGAATTTAGGTTGAAAGGGACAAAAAATGATGATAGATCTGTATCTTTGACCTTGCGTATTGCGGATTCGTCTGGTCGAGTTAGGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGTTAGCAGAACATGATGTGATCTTCATCGCCGGGCTTATTGATCATTTGATGACAAAACTTCTACCTGACTGGAAACCTTCATCTGATTATTCCTCAAGTGAAGTAACAAGCCTCAATGGTGGTGGGTCTTCAACACTTGTAGATGGCCAGACCCAAACAAGTCTATGGGATTCCATCCTAACAAGTGATGCTGCTGGATTAGTTATGTACCAAGACAACGTGTTAGGGCCAATTACTGATGATCAAAACAGATCCGCAACCTCTGCGCTAGTTGCTAAAGATTCATCGATAAAAATTGACAACTTTCTCGATTTCAATGGGAGCCCTAAATCCTTGAGTTGGGCTTGCAAATTGCAGAGCACACTAGATAACAGCTTTATGAAGAATGAAACGATTCCACCATTCAATGGAACATATAATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTAACAGAGGAGAACGCAGATTCTGAGCTGAAGTTGGAAATTGATGCAATCAAGGCTTTCTATCGCGAACAGTTTCAAGAACTTTCTAGAAGGAAGTTGGCCCATTTGGATCTCATCAGAAAGAGATGGATAGCTAAGAAGAAATTGACTGATGGAAAAACAAAAGATAATGTGAAAAAACTTGGATCCATGAGTAAGCATGTTAGAGAATTTAGCCCTCACGCCATTGGTTTCTGCACTTATCATTCAAGCACATGTAGAATATTGTTGCTGGCTCATCAGCTGATCGAGTCTGAAGCTCTGTGTAAGCAGCTTTATCATGATTGCATTTTGGACATGGGACTGCCAAAAAAGGGTGTCAAGGAAGATAGGCAGCTCATGACTGGTCTGCACACAGTTTCTGATGCGTATTGCTCTGATTGTGGACAAGCTTTGGGATGGAAATATATCAGAGCTTATGAACAATCCCAGAAATACAAAGAGGGAAAATCCATCCTAGAAAAATTCAAGATCGCCATCACCACTAATGGATCTTTGTGA 2283 0.4074 MDSGVESASPENDGTGTKDPARLDEDFAEKDPTGRYIRARVLSRLYRAFDEVDGIEVAWNQVRIEDLLQSVVDLAKLYSEVHILKSLKHENVMKFYHSWVDDKNKSVNMISELFTSGTLRQYVVMSDFLALLLSCSAVTFASEIIVRILANRYRRKHKNVDMKAIKGWARQILQGLAYIHSQNPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTTGIKPASLNRVNDPQIREFIEKCLVPASERLSAEELLKDPFLQVENPKNPVRDPLQLPPQTPISIDLSRSGPLSMEIDADYNQISVSTFAESNCGSPQSPMLEFQRISEENEFRLKGTKNDDRSVSLTLRIADSSGRVRNIHFLFYLDSDTAVSVASEMVEQLELAEHDVIFIAGLIDHLMTKLLPDWKPSSDYSSSEVTSLNGGGSSTLVDGQTQTSLWDSILTSDAAGLVMYQDNVLGPITDDQNRSATSALVAKDSSIKIDNFLDFNGSPKSLSWACKLQSTLDNSFMKNETIPPFNGTYNAFSLTSSCSSLSLTEENADSELKLEIDAIKAFYREQFQELSRRKLAHLDLIRKRWIAKKKLTDGKTKDNVKKLGSMSKHVREFSPHAIGFCTYHSSTCRILLLAHQLIESEALCKQLYHDCILDMGLPKKGVKEDRQLMTGLHTVSDAYCSDCGQALGWKYIRAYEQSQKYKEGKSILEKFKIAITTNGSL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0227 760 MobiDBLite consensus disorder prediction 1 25 - -
Lele43g0227 760 Gene3D - 388 466 - -
Lele43g0227 760 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 704 757 IPR004910 -
Lele43g0227 760 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 390 445 IPR024678 GO:0004674|GO:0005524
Lele43g0227 760 Gene3D Transferase(Phosphotransferase) domain 1 149 312 - -
Lele43g0227 760 Gene3D Phosphorylase Kinase; domain 1 22 112 - -
Lele43g0227 760 FunFam Probable serine/threonine-protein kinase WNK1 22 112 - -
Lele43g0227 760 ProSiteProfiles Yippee domain profile. 660 756 IPR034751 -
Lele43g0227 760 Pfam Protein kinase domain 45 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0227 760 SMART serkin_6 36 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0227 760 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Lele43g0227 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lele43g0227 760 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0227 760 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0227 Lele-ChrLele43 2047196 2052108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0227 26 629 MAP Kinase Kinase Kinase AT5G41990 44.374 2.99e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele43g0227 Pkinase 1.5e-31 CL0016