Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0221 ATGGGAAGAGCTCCTTGTTGTGCAAAAGTAGGGTTGCAGAGAGGACCATGGACTCCTAAAGAAGATGCATTGCTCACTAGGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCTAAAAAAGCTGGGCTTCTGAGATGTGGGAAAAGTTGCAGACTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGGAACATAACTCCTGAAGAAGACGACCTCATCATCAGAATGCATTCTCTCATCGGAAACCGCTGGTCTCTCATCGCCGGCCGGTTACCAGGCCGAACAGATAATGAAATCAAGAACTACTGGAACACTCATCTCAGCAAAAGAGTCAAGGACCAACAATCAGGGCCTGATGATCATCATCATCGACCAAAAGAGAAGAACACGAAGAAGAAGAAGAAGCCCACAACAAAAAATAAAAACAGTAAGAACAAATCCATCAACAGTGATAATAATGAGGAGGCAGAAGAAGGAGAGAAGAAGACAAATATATATCTTCCGAAACCAATCAGGGTTAGGGCTTTGCATATAAGCGGAAACGAAGAAGATTCCAAGAACGATTCTTCTTCAGCAAGTGGATCTTCAAGCCAAGAGATATTACAGAAGGAAGACATGGATGTGATGAGTTATGAGCCGTGGGGTGAAAATGACGTGTTTGGGTTCTTTGTTGAAGAAGATCAGAATATTGACAGAGTCAACGCCTCAATATCAGAAGGAAATATTAGTATTAATAATAATAATTATAATGATATGGAATGCGAGTCACTGGAGAGGCTATACGAGGAGTACTTGCAGCTCTTAAATGATGATAATGTTGTTAGTGATGAAAACCAAGGGCAATTGGATTCTTTTGCTCAATCTTTTTTTCTCTAA 891 0.4097 MGRAPCCAKVGLQRGPWTPKEDALLTRYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRVKDQQSGPDDHHHRPKEKNTKKKKKPTTKNKNSKNKSINSDNNEEAEEGEKKTNIYLPKPIRVRALHISGNEEDSKNDSSSASGSSSQEILQKEDMDVMSYEPWGENDVFGFFVEEDQNIDRVNASISEGNISINNNNYNDMECESLERLYEEYLQLLNDDNVVSDENQGQLDSFAQSFFL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0221 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele43g0221 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele43g0221 296 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele43g0221 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele43g0221 296 MobiDBLite consensus disorder prediction 131 146 - -
Lele43g0221 296 MobiDBLite consensus disorder prediction 185 204 - -
Lele43g0221 296 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele43g0221 296 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 229 - -
Lele43g0221 296 SMART sant 66 114 IPR001005 -
Lele43g0221 296 SMART sant 13 63 IPR001005 -
Lele43g0221 296 MobiDBLite consensus disorder prediction 114 171 - -
Lele43g0221 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele43g0221 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele43g0221 296 Gene3D - 14 66 - -
Lele43g0221 296 MobiDBLite consensus disorder prediction 114 130 - -
Lele43g0221 296 CDD SANT 71 112 IPR001005 -
Lele43g0221 296 FunFam MYB transcription factor 68 131 - -
Lele43g0221 296 FunFam Myb transcription factor 11 67 - -
Lele43g0221 296 Gene3D - 69 130 - -
Lele43g0221 296 CDD SANT 16 61 IPR001005 -
Lele43g0221 296 MobiDBLite consensus disorder prediction 153 171 - -
Lele43g0221 296 MobiDBLite consensus disorder prediction 190 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0221 Lele-ChrLele43 2006128 2007407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0221 1 142 MYB Transcription Factor Family AT4G38620 65.035 4.66e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele43g0221 Myb_DNA-binding 1.3e-13 CL0123