Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0217 ATGGCACATCTGGGCTGTAATCTCAGCGGCCCGACCAGTTCTCCGGCGAATACAGGTCAATGGCTATTCTTTTATGCAGGATTACTCTGTTTGGGTGCTGAGAAAGTTGTGGGAGAAAAGGAAAACGTCTTTGTTTTGTGCAAGCACTCGTGGGAGTGTTTGGAAGATGACGATCCGTATACAGAGTTATGGAAGTTATGCGCTGGGCCTCTGGTGGATGTTCCTCGAAATGGGGAGAGAGTTTTTTACTTCCCTCAGGGTCACATGGAACAAGTATGGTCTTTCTTGTTTCTTTTGCCATTTAGGGTTACAGTTGCTTTCAAATTCTTTCGAAATCATGCGGAACCAGACACTGATGAAGTTTATGCTCGTATTACTTTGCTTCCAGAATCAGATCAAACTGAGCCTACCAGCTCTGATCCATGTCCACCAGAGAGTCGGACGCAGGCTTTTCATTCATTTTGCAAAATACTAACAGCATCTGATACTAGCACTCATGGAGGATTTTCAGTTCTGCGGAAGCATGCTAATGAGTGTTTGCCTCAATTGGACATGACCCAAGCAACCCCTACTCAGGAGTTAGCAGCAAAGGATCTTCATGGGTTTGAGTGGAAATTTAAGCATATATTCAGAGGTGATTTGAATTCTATTTTTGCCAGTTCTCCTGCTGAGGTTGCCTATGGTTTTGGTCTCTATAGGGGAGAGAATGGAGAACTGAGAGTTGGTGTCCGGCGCCTTGCCCGACAACAGAGTCCGATGCCTTCATCTGTGATATCAAGCCAGAGCATGCATCTTGGAGTGCTTGCCACTGCTTCCCATGCTGTTGCCACTCGTACCATGTTTGTAGTTTACTACAAACCAAGGACTAGGCAGTATATTATTGGTTTAAACAAATACCTGGTCGCGATCAACAATAAGTTCACAGTTGGCATGCGTTTCAAGATGAGATTTGAGGGGGATGATTCACCTGAGAGAAGATTTTCAGGAACTATTGTTGGAGTTGGCGATTTATCTGCAGAGTGGCCAGACTCAAAGTGGCGGTCATTGAAGGTACAATGGGATGAACCAGCAACAATCCCAAGGCCAGAGAGGGTTTCTCCCTGGGAAATAGAACCTTTTGTTAATTCTGCACCTGTAAATCTCGTTCAACCAGCCGTAAAGAGCAAAAGATCTCGGCCTGCTAATGTTCCATCTTCTGAAATGGTTTCCAATTCAGCTGCTTCAGCTTTCTGGTATCAGGGGCCATCCCAGTCCCATGAGCTTGCTCAATTAGGTGGCGCAACAGAAGCCCAAAGTAATGAAAACCAGGTTTTATGGAGCATAAGGCAGAACAACAACATGAATGGCAATGCAATGAACAACAGTAGCTTCTGCAACTCTAGAGTCCGGGTTGAAGGAGCGTGGCCTCCATCACATTTGAACATCTCTTCAAACTTTTTTCCCGACCCCAAAAGCAACAAAGCTGTTGCAGTTCAATCGTCTATCTCTTGCTGGCCAAATGATGCTCTTCCAGCATATGATCAAGTTGAGAATGGGAAGAAATCTGAGAATCCCGTGGGTTGCCGGCTATTTGGTGTCAATTTGACTAACAACTCTAATAATGTTACTCCTCTAGAGAAAGAGTCAAGAGGCTGCACTGCTAGTCCTAGTGGTTCCAAAGAATCTGTTCCTGTTGCAGCTTGTGAAACTAAGAAAAGTCAGAATCCCAATTGTTCAGTGTCCATAAAGGAGCAGAAGCAAGTAACACCTAATGCATCACCAAATGAGAGGCAGAGCAAGCAGGCATCCTTACCATCCACGAGGACTCGCACGAAGGTACAAATGCAAGGAGTGGCCGTTGGTCGTGCTGTTGACTTGACTATGTTGAATGGCTACGACAGTCTGATCGAAGAGCTCGAAAGGTTGTTCAACATTATAGGGGAGCTTCGTACACAGGACAAATGGAAGGTTACTTTCATAGATGATGAGAATGAGAGGATGCTCATGGGCGATGATCCGTGGCCGGAGTTTTGCAAAATGGTGAAGAGGATTACCATATATTCAAGTGAGGAACTGAAGAAGATGAATGCAACATGCCCGGTCACTGCATCTTCATCAGAGGATGATGAAACTCTGATCAATGTGAATTCGCAGAATAAGGATGAAAGTCAGTAA 2154 0.4503 MAHLGCNLSGPTSSPANTGQWLFFYAGLLCLGAEKVVGEKENVFVLCKHSWECLEDDDPYTELWKLCAGPLVDVPRNGERVFYFPQGHMEQVWSFLFLLPFRVTVAFKFFRNHAEPDTDEVYARITLLPESDQTEPTSSDPCPPESRTQAFHSFCKILTASDTSTHGGFSVLRKHANECLPQLDMTQATPTQELAAKDLHGFEWKFKHIFRGDLNSIFASSPAEVAYGFGLYRGENGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVATRTMFVVYYKPRTRQYIIGLNKYLVAINNKFTVGMRFKMRFEGDDSPERRFSGTIVGVGDLSAEWPDSKWRSLKVQWDEPATIPRPERVSPWEIEPFVNSAPVNLVQPAVKSKRSRPANVPSSEMVSNSAASAFWYQGPSQSHELAQLGGATEAQSNENQVLWSIRQNNNMNGNAMNNSSFCNSRVRVEGAWPPSHLNISSNFFPDPKSNKAVAVQSSISCWPNDALPAYDQVENGKKSENPVGCRLFGVNLTNNSNNVTPLEKESRGCTASPSGSKESVPVAACETKKSQNPNCSVSIKEQKQVTPNASPNERQSKQASLPSTRTRTKVQMQGVAVGRAVDLTMLNGYDSLIEELERLFNIIGELRTQDKWKVTFIDDENERMLMGDDPWPEFCKMVKRITIYSSEELKKMNATCPVTASSSEDDETLINVNSQNKDESQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0217 717 Coils Coil 625 645 - -
Lele43g0217 717 FunFam Auxin response factor 306 377 - -
Lele43g0217 717 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 60 689 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele43g0217 717 SUPERFAMILY DNA-binding pseudobarrel domain 147 274 IPR015300 -
Lele43g0217 717 MobiDBLite consensus disorder prediction 561 606 - -
Lele43g0217 717 MobiDBLite consensus disorder prediction 532 606 - -
Lele43g0217 717 Pfam Auxin response factor 271 350 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele43g0217 717 MobiDBLite consensus disorder prediction 695 717 - -
Lele43g0217 717 Pfam AUX/IAA family 587 638 IPR033389 -
Lele43g0217 717 ProSiteProfiles PB1 domain profile. 601 682 IPR000270 GO:0005515
Lele43g0217 717 SMART B3_2 154 247 IPR003340 GO:0003677
Lele43g0217 717 SUPERFAMILY CAD & PB1 domains 596 679 - -
Lele43g0217 717 Gene3D - 306 377 - -
Lele43g0217 717 MobiDBLite consensus disorder prediction 532 553 - -
Lele43g0217 717 Gene3D - 597 689 - -
Lele43g0217 717 Gene3D - 151 246 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0217 Lele-ChrLele43 1980026 1984153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0217 60 688 B3 DNA Binding Superfamily AT4G23980 50.842 0.0 565