LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0185	ATGGAGGAAGGGCAATTTAGTCTCATCAAAGAGCTAAACCAAGGGAAGGAGCTCGCAAGGCGGCTCTGTAACCATATTGCATCTTCTTCTCATGAGATGAATGAGTTCTTGATTGAGAAAATACTCTGTTCTTATGAGAAAGCTCTGAAGATTCTTACACATGGACAAAATGTGGGTGATCCTAATCCCTCCATTAATGCTGGTAGGAGCCCCAGATGTGAGGTGTTGGACCAGGAAGACAATCACAGAGATGTCTACAAGAAAAGAAAGATCATGCCTAAATGGTCAGAGCAAGTGAAGGTTTGCTCAAGAACAGGGATTGAGGGTTCCTTGGATGATGGATACAGTTGGAGAAAATATGGCCAGAAGGATATCCTCGGAGCTAAATTTCCTAGAGGATACTACAGATGCACTCATAGATTTTTACAAGGTTGTGAAGCAACAAAACAAGTTCAAAGGTCTGATGAAGATCCAACAATATTCGAAGTGACCTACAGAGGAAGACATACGTGCAACAACCAGGCATACTTAAATAAGGCGGCAGCATCATCAAAGAAAAATAAGATGGGTTTTGGCGAAAACCATCATCAACACCATAAAAGAGAGGACGAGGAAGAAGAGAAGATGGAACAATACCTAGTGACATTCTTCAATTTTGAACCAGAACTTGAAGTTAAAATGGATGACATTTTCCCTACATCGAGTGGATTTCCTTCGACATCCGATAATTACTAG	735	0.4109	MEEGQFSLIKELNQGKELARRLCNHIASSSHEMNEFLIEKILCSYEKALKILTHGQNVGDPNPSINAGRSPRCEVLDQEDNHRDVYKKRKIMPKWSEQVKVCSRTGIEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRFLQGCEATKQVQRSDEDPTIFEVTYRGRHTCNNQAYLNKAAASSKKNKMGFGENHHQHHKREDEEEEKMEQYLVTFFNFEPELEVKMDDIFPTSSGFPSTSDNY	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0185	244	SUPERFAMILY	WRKY DNA-binding domain	110	173	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele43g0185	244	Pfam	WRKY DNA -binding domain	112	172	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele43g0185	244	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	7	208	IPR044810	GO:0003700
	Lele43g0185	244	MobiDBLite	consensus disorder prediction	186	206	-	-
	Lele43g0185	244	Gene3D	WRKY domain	96	173	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele43g0185	244	SMART	WRKY_cls	111	173	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele43g0185	244	FunFam	WRKY transcription factor 53	97	174	-	-
	Lele43g0185	244	ProSiteProfiles	WRKY domain profile.	106	174	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele43g0185	244	MobiDBLite	consensus disorder prediction	189	206	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0185	Lele-ChrLele43	1695992	1697526	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g0185	5	188	WRKY Transcription Factor Family	AT4G23810	43.363	1.35e-47	158

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele43g0185		WRKY	6.6e-28	CL0274