Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0180 ATGGCTGCAAATGGTGGGAAAGGGACTGAGAAACAGAATAGGAAAGCTAGTGATTGTTTTGGGGACCGAAACATGTCAAGTTCACCGAGAATGAGAGCACCTACGAGGAAGGATTGGCCAGCGGAGAGCCTTTTGAATGGAAATGATATTGGTAATGAGGATAAGCATTTGGATAGGTGCCGTGCTTCCTTGGCTGGATCTGGACCTCATAGTGCTAGCGTTTGTTCTACAACAAGCAATGGACACATTGTTGAGGAGTTAACTTTTAGAAATTATACGAACCCAAATTCAACTTTAGTTAGTTCCAGACTACCTCAGATAAACCAATTAGGTAATGAGTCTGGATGTATAGACTCAACTAGAGAAATTGTATCAAAGGATGAAGAAAATATATCCAACAGGCCCAGCAAGGAAATTAAGGGCAATGCTTCTAATTTTTGGAGCTTGAAGTCTTTGTCCAGTAAGAAAATGAATCTTGACCCAGAAAAAATTGCTGAAAATAGAGGCAATGGGGACAAGACAATCACCTCAAGCAATGCACTTCTGGTTAGCACTTCAATGCAGGACACTACATCTACATACAATTTTTCTCCATTGGCACTGAAACAAAAACTGAAGGGAAAGGGAGTTATCTGCAAAGATGAAGCAGACAACAGTGTTGAGCCCCATGGAGCATTTAGTGGCCACGAGGATAAAACACCTGCCTGTATGGATAAATCTCATTCTAATACACTGCTGAGAACTAATGCTGCTGATGAGGATAAGCCTTTGCAAAAATTTGTCATGTCCAGTGCAGAATCCTCTGATGATGGGACCAACTTAAGAGAGTGGTTGATTTCTTCAGGTCACAAAGTTAATAAACAAGGAAGACTACATATTTTTAAACAAATCCTGGAATTCGTCAATTATGCGCACTCCAAGGGAGTTGTATTGCAAGACTTGAGACCCTCTTGTTTCACTTTATTGCCTTCAAATAAAGTTAAGTACACTGGTTCACTAGTCCAAGTAGAGTTATATAATGTCCCGGCATGCACCGTGACTAGGAAAAGGCCTATGGAAGAGGATTTCTGTTCATGCCTTAGTTTGAGTGCAAAGCAGAAAAAACTCCGCAAGGAGATGAGATATATTGGGCAACAGAATTCCTTTAGATCTAATTTTGTCTGCAGGAGTAAACCAGTGAATCTTATTGATTCCTGCAAAATTGGATCAATGAATCCAAGAATTACAGAAAGTATGCACCAAAACAGTTTTAGATGCCAACATTCAACAGATGCAAAGCAAATAACTGATGTGACTGCTCAGTTGGAAGAGAAGTGGTATTCTAGTTCGGAAGTTCTCAATTATGGAGGCTTCACGTTTTCATCCAATATTTATAGCCTTGGGGTTCTGCTCTTTGAGTTGCTGTGCAATATTGAGTCATGGGAGGCACATTCAGAAATGATGTTGGATCTGCATCAGCGAATCCTACAACCAAAATTTCTATCTGAGAATCCAAACGAAGCTGGATTTTGTCTTTGTCTTTTGCATCCTGAACCTTCTTCTCGTCCCAATACTAGGATGATTTCAGAATCTGAAATATTCCGTGATTTAGTGGAATTGAATTCTCAGGATGATATCTTGGTACCTGATGATGATGAAGCTGAAACAGAGCAACTGATATATTTTTTAACTTCGCTTAGAGAAGAAAAGGAAAAACAGATTGCCAAATTAGCTGAAGAGCTACGTTGCTTAGAAGAAGATATTAAAGAGGTTGAAAGAAGGTATTCACTTGCGACAGCTTCATTATTTCCTATGGCAAAAAATGGCGTTTCTAAATTCAGTAGAAACAGTTTTCATCTTGAAGATCCTTTCAGTTCAGATATTGGAAGATCAATTCAAGCATCATGTGTTAATGAAGCCAGATTTATGAGAAATATCAATCAGCTAGAGGCTGCATACTTCTCCATGAGATCCTGGATCCTGCTTACAGAAGATGCAACTGTTGCACCCTATGATAAAGATGTGCTAAAAAATAGATGGAGATTGTCTCGAGTACATAACGACAATGAGGAGCAAAGAACGAAATGGGGATCCACGGATCGCCTTGGACCCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACAGTAAGTTTGAAGAGTGTGGCATATTAAGAAGTCAAGATCTTCTTAATTCTTCCAATGTAATATGTGCATTAAGTTTTGACCGTGATGAGGACTACATTGCAGCTGCTGGAGTTTCAAAAAAAATCAAGATTTTCGATGTCAGTACAATTTCAAGCAATTCTATTGACATCCAGTACCCCGTAGTTGAGATGTCGAGTAAATCAAAGCTTAGCTGTGTGTGTTGGAACAGCTACATCAAAAGCCATTTGGCATCTACCGATTATGATGGTGTAGTTCAGATGTGGGATGCGGACACTGGTCAACCATTTTCTCAATACACGGAACACCAAAAGAGAGCATGGTCCATTCACTTCTCTCAGTCCGACCCTAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTGAAACTATGGAACATCAGCGAGGCATGCTTTCTTTTATGCATAATACCTGCAGAAGACAGAAACTCCATTTGCACCATATGGAACCCCGCCAATGTATGCTGTGTTCAGTTCTCTTCATACTCAACAAATCTTTTAGTTTTTGGATCAGCTGATTACAAAATCTATGGTTATGATCTCCGGCACACTAGAGTCCCTTGGTGCACATTATCTGGTCATGGGAAAGCTGTTAGCTTCGTAAAATTTCTGGACTCTGAAACACTTGCCTCAGCTTCCACAGACAACTCTTTGAAGCTCTGGGACCTGAAGAAAACCAGCTCTTCGGGGTCTTCATCTGGTGCTTGTAGCTTAACCTTTAAAGGCCATACTAACGAAAAGAATTTTGTGGGTTTGTCTGTCTTTGATGGATACATTGCATGTGGTTCAGAAACTAATGAGGTATATTGTTATCACAGATCTCTGCCAGTGCCTATCACTTCTTACAAAGTTGGATCCATTGATCCCATTTCTAGACAAGAAAATGATGATGGTAATGGACAGTTTCAGACTGGGGAAAAGGCTGAAATAGGGTCAAATGGCAATGGTTCAAAGAAGCATGTGTGCTTGAACTGCACCCGTGCTGAAACTGAAGCCTGTGACTCTTGTGACACTTCCACTGGTGAGTCTAACTATTTGATCACTACAGCACACTGGCCAAAGCTAAATACAGAAACTTTTCATTCAACAAATTCTCATCTACGGCTTATTTCTCCTGCCAACAAGCTAGGATACCAGGCTGACCTCAAATGCTTACTTGAAATTGTAAGTAATGCATAG 3342 0.4019 MAANGGKGTEKQNRKASDCFGDRNMSSSPRMRAPTRKDWPAESLLNGNDIGNEDKHLDRCRASLAGSGPHSASVCSTTSNGHIVEELTFRNYTNPNSTLVSSRLPQINQLGNESGCIDSTREIVSKDEENISNRPSKEIKGNASNFWSLKSLSSKKMNLDPEKIAENRGNGDKTITSSNALLVSTSMQDTTSTYNFSPLALKQKLKGKGVICKDEADNSVEPHGAFSGHEDKTPACMDKSHSNTLLRTNAADEDKPLQKFVMSSAESSDDGTNLREWLISSGHKVNKQGRLHIFKQILEFVNYAHSKGVVLQDLRPSCFTLLPSNKVKYTGSLVQVELYNVPACTVTRKRPMEEDFCSCLSLSAKQKKLRKEMRYIGQQNSFRSNFVCRSKPVNLIDSCKIGSMNPRITESMHQNSFRCQHSTDAKQITDVTAQLEEKWYSSSEVLNYGGFTFSSNIYSLGVLLFELLCNIESWEAHSEMMLDLHQRILQPKFLSENPNEAGFCLCLLHPEPSSRPNTRMISESEIFRDLVELNSQDDILVPDDDEAETEQLIYFLTSLREEKEKQIAKLAEELRCLEEDIKEVERRYSLATASLFPMAKNGVSKFSRNSFHLEDPFSSDIGRSIQASCVNEARFMRNINQLEAAYFSMRSWILLTEDATVAPYDKDVLKNRWRLSRVHNDNEEQRTKWGSTDRLGPFFEGLCKFARYSKFEECGILRSQDLLNSSNVICALSFDRDEDYIAAAGVSKKIKIFDVSTISSNSIDIQYPVVEMSSKSKLSCVCWNSYIKSHLASTDYDGVVQMWDADTGQPFSQYTEHQKRAWSIHFSQSDPKMFASGSDDCSVKLWNISEACFLLCIIPAEDRNSICTIWNPANVCCVQFSSYSTNLLVFGSADYKIYGYDLRHTRVPWCTLSGHGKAVSFVKFLDSETLASASTDNSLKLWDLKKTSSSGSSSGACSLTFKGHTNEKNFVGLSVFDGYIACGSETNEVYCYHRSLPVPITSYKVGSIDPISRQENDDGNGQFQTGEKAEIGSNGNGSKKHVCLNCTRAETEACDSCDTSTGESNYLITTAHWPKLNTETFHSTNSHLRLISPANKLGYQADLKCLLEIVSNA 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0180 1113 PRINTS G protein beta WD-40 repeat signature 791 805 IPR020472 -
Lele43g0180 1113 PRINTS G protein beta WD-40 repeat signature 930 944 IPR020472 -
Lele43g0180 1113 PRINTS G protein beta WD-40 repeat signature 834 848 IPR020472 -
Lele43g0180 1113 MobiDBLite consensus disorder prediction 1014 1033 - -
Lele43g0180 1113 SUPERFAMILY Protein kinase-like (PK-like) 271 530 IPR011009 -
Lele43g0180 1113 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 912 945 - -
Lele43g0180 1113 Coils Coil 560 594 - -
Lele43g0180 1113 ProSiteProfiles Trp-Asp (WD) repeats profile. 814 849 IPR001680 GO:0005515
Lele43g0180 1113 ProSitePatterns Trp-Asp (WD) repeats signature. 930 944 IPR019775 -
Lele43g0180 1113 MobiDBLite consensus disorder prediction 1 52 - -
Lele43g0180 1113 MobiDBLite consensus disorder prediction 1014 1032 - -
Lele43g0180 1113 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 814 849 - -
Lele43g0180 1113 Gene3D - 699 1032 IPR015943 GO:0005515
Lele43g0180 1113 Pfam WD domain, G-beta repeat 911 943 IPR001680 GO:0005515
Lele43g0180 1113 Pfam WD domain, G-beta repeat 808 847 IPR001680 GO:0005515
Lele43g0180 1113 ProSiteProfiles Protein kinase domain profile. 162 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0180 1113 SMART WD40_4 719 754 IPR001680 GO:0005515
Lele43g0180 1113 SMART WD40_4 862 901 IPR001680 GO:0005515
Lele43g0180 1113 SMART WD40_4 954 993 IPR001680 GO:0005515
Lele43g0180 1113 SMART WD40_4 765 804 IPR001680 GO:0005515
Lele43g0180 1113 SMART WD40_4 905 943 IPR001680 GO:0005515
Lele43g0180 1113 SMART WD40_4 807 847 IPR001680 GO:0005515
Lele43g0180 1113 Gene3D Transferase(Phosphotransferase) domain 1 270 536 - -
Lele43g0180 1113 ProSiteProfiles Trp-Asp (WD) repeats profile. 912 952 IPR001680 GO:0005515
Lele43g0180 1113 PANTHER PROTEIN SPA1-RELATED 2 21 1023 IPR044630 GO:0009640
Lele43g0180 1113 SUPERFAMILY WD40 repeat-like 722 1005 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0180 Lele-ChrLele43 1624327 1630414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0180 811 992 Miscellaneous Gene Families AT5G08390 25.806 1.11e-08 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Lele43g0180 WD40 0.0011 CL0186