Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0172 ATGGGAAACAGTGAGGAAGGGAAGTCTACTAAAGTGGACAAACCCTCTTCACCGGTGACACCGGATCAGGCAAACCAGATCAACCCGACCAATATTCATCTGTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCACCTTATGGGGCGCCATATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCATCCTGCAGTTCCTATTGGTCCGCAGTCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCATGGAGCCACCAACCAAATCGACTGGAAATAATGATCAGGGCTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGAGTTGAAAATAGGCTATCACAGAGTGAGGATACTGAAGGTTCAAGTAATGGAAGTGACGGCAACACTTCTGGGACTAATCAAAAAAGAAGGAAAAGAAGCCGAGGGGGAACACCAACCACTGGTGGGGATGGGAAAGCTGAGATACAGGGAACTCTACTTCCCAAAGAGACTGCCGCTTCCAATAAGTTGGCGGCAGTTGTCCCTGCAGGTGTTGCAGGAAAAATAGCTGGACCTTCAGGTATGACCACTGCTCTGGAGTTAAGGAACCCTCAGACTGTTCATTCTAAACCGAATCTCACAAATGTTGCCCAACATGGTGCAGTGATTCCTCCTGAAGCTTGGTTGCAGAATGAACGTGAGCTGAAGCGAGAGAGGAGGAAACAGTCCAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGGAGAGCTTGCACGAGAAGTTGAATCCTTGAATGCTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGTCTGAAAATTCTGAGAAACTGAGAGCAGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGACAGACAGAAGAAATAGTTTTGAACAGCATTGAGGGCAAGAGGGCTACACCGATAAGCACGGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAACGATAGAACTACGGAGGAAGATAATGATTTTTGTGATGAGAAACAGAACTCCAGTGCAAAGCTGCATCAACTACTTGATACGAGTCCTAGAGCTGATGCCGTGGCTGCTGGCTGA 1272 0.4646 MGNSEEGKSTKVDKPSSPVTPDQANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSMEPPTKSTGNNDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSNGSDGNTSGTNQKRRKRSRGGTPTTGGDGKAEIQGTLLPKETAASNKLAAVVPAGVAGKIAGPSGMTTALELRNPQTVHSKPNLTNVAQHGAVIPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETGELAREVESLNAENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIEGKRATPISTENLLSRVNNSSSNDRTTEEDNDFCDEKQNSSAKLHQLLDTSPRADAVAAG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0172 423 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele43g0172 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Lele43g0172 423 Gene3D - 281 335 - -
Lele43g0172 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Lele43g0172 423 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Lele43g0172 423 MobiDBLite consensus disorder prediction 279 308 - -
Lele43g0172 423 MobiDBLite consensus disorder prediction 149 213 - -
Lele43g0172 423 SUPERFAMILY Leucine zipper domain 281 337 IPR046347 GO:0003700|GO:0006355
Lele43g0172 423 MobiDBLite consensus disorder prediction 386 402 - -
Lele43g0172 423 Pfam bZIP transcription factor 278 340 IPR004827 GO:0003700|GO:0006355
Lele43g0172 423 MobiDBLite consensus disorder prediction 1 29 - -
Lele43g0172 423 Coils Coil 312 353 - -
Lele43g0172 423 MobiDBLite consensus disorder prediction 13 29 - -
Lele43g0172 423 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Lele43g0172 423 Pfam Disordered region downstream of MFMR 132 256 - -
Lele43g0172 423 MobiDBLite consensus disorder prediction 167 184 - -
Lele43g0172 423 MobiDBLite consensus disorder prediction 98 134 - -
Lele43g0172 423 MobiDBLite consensus disorder prediction 374 423 - -
Lele43g0172 423 Pfam G-box binding protein MFMR 1 99 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0172 Lele-ChrLele43 1567900 1570996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0172 1 423 bZIP Transcription Factor Family AT2G46270 51.402 1.82e-122 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele43g0172 MFMR_assoc 1.3e-21 No_clan