Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0151 ATGTCCCCCTCCTCCTCCGCCGCCACCTCCTTCCTCTCCAACATCGGCCTCGGCTACTCCATCGCCATCGCCCTCGCCTTCCTCTTCCTCCTCTCCACCCTCCTCCTCTCTTCCTACCTCTGCTGCCGCTCTAACCCTCCCCCGCCTCCTTCCCCTCCCCCTCCCCCCGACGGCATCATTCTCCCCCGCATCATCTTCGTCGCCGACGACGACGACAGCCGTGATGATAACTCCATCGCCCTCGGCCTCACCCCTAACGTCATCAACTCCTACCCGAGGTTCTCCTACACCAAGGACGACACTACTCTTGCCTCCGCCCCCGCCGCCGATCACAACGTCACGTGCTCCATCTGCTTGTGCGAGTACAAGGACTCCGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTTCTTCCACCTCGCCTGCCTCGATGCATGGCTCAAGCTCAACGGCTCCTGCCCGGTCTGTCGAAACTCCCCGCTTCCTACTCCGATCTCAACTCCGATCTCGACGCCGTTGCAGGAGGTGGTGCCTCTCTCTCAGTACGCCGCTGATCGGAGGCGGAGCAGTTGA 573 0.6248 MSPSSSAATSFLSNIGLGYSIAIALAFLFLLSTLLLSSYLCCRSNPPPPPSPPPPPDGIILPRIIFVADDDDSRDDNSIALGLTPNVINSYPRFSYTKDDTTLASAPAADHNVTCSICLCEYKDSEMLRMMPECRHFFHLACLDAWLKLNGSCPVCRNSPLPTPISTPISTPLQEVVPLSQYAADRRRSS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0151 190 Pfam Ring finger domain 114 157 IPR001841 -
Lele43g0151 190 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Lele43g0151 190 SMART ring_2 115 156 IPR001841 -
Lele43g0151 190 PANTHER RING-H2 FINGER PROTEIN ATL67 4 189 IPR044289 GO:0016567|GO:0016740
Lele43g0151 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 161 IPR013083 -
Lele43g0151 190 SUPERFAMILY RING/U-box 114 162 - -
Lele43g0151 190 CDD RING-H2_PA-TM-RING 114 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0151 Lele-ChrLele43 1456377 1456949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0151 16 181 C3H Transcription Factor Family AT5G06490 36.207 9.89e-33 114