Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0150 ATGTCTTCGTCGGAACCCGCCATCCTCGCCACCAACGGCGAATGGACTGATGATGGCGTCTCCGCTTTCATCTCCGACCTCAGCATTGGCTCCTTATTCACCAAGGCACTCCTCATCCTCCTCTTCGCCTTCTTCGTCATCCGCCTGTTTATCACCATTTTCCGCCGCCGCTGCCACGACAACCATCAAGACAGCCGCAACAATGTCCCTAACTCAACCGCTCATAATCCCAACGTCCCCCATGACGAAGAGAACCCGGTGCAAAATGATGCGGAGGCAACCAGTAGGGCGGTCCACATTGAAGTCGCCATAAGCTGGTACCCGAGTTTCATGTACGGTGATGAGAAAGCCAACGACCGGAACAACACGACATGTTCGATTTGCATGTGCGAGTATTTGGAGTCGGAGATGATGAGGATGATGCCGCAATGTGGGCATTACTTCCACCTTAAATGTCTCGACGAATGGCTGAGGATTAATTGGTCGTGTCCTGTGTGTCGTGACTCGCCGCCATTGCCACATGCCACGCCTTCGTTGCCGCACGCCACGCCGTCGTCGCCTGTGGCGATGCCGCCATCGTCATGA 585 0.5504 MSSSEPAILATNGEWTDDGVSAFISDLSIGSLFTKALLILLFAFFVIRLFITIFRRRCHDNHQDSRNNVPNSTAHNPNVPHDEENPVQNDAEATSRAVHIEVAISWYPSFMYGDEKANDRNNTTCSICMCEYLESEMMRMMPQCGHYFHLKCLDEWLRINWSCPVCRDSPPLPHATPSLPHATPSSPVAMPPSS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0150 194 MobiDBLite consensus disorder prediction 65 83 - -
Lele43g0150 194 SUPERFAMILY RING/U-box 124 175 - -
Lele43g0150 194 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Lele43g0150 194 SMART ring_2 125 166 IPR001841 -
Lele43g0150 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 172 IPR013083 -
Lele43g0150 194 PANTHER RING-H2 FINGER PROTEIN ATL67 19 187 IPR044289 GO:0016567|GO:0016740
Lele43g0150 194 MobiDBLite consensus disorder prediction 64 86 - -
Lele43g0150 194 Pfam Ring finger domain 124 167 IPR001841 -
Lele43g0150 194 SMART FANCL_C_2 121 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0150 Lele-ChrLele43 1450059 1450643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0150 36 167 Rapid Response to Elicitors AT2G35000 34.328 1.54e-19 83.2