Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0139 ATGGAGGACGATTGGGATCTGCACGCCGTCGTCAGAGGATGCGCCACCGTCTCCTCCTCCTCCTCCTCTTCCTCCTCCGCCACCGCCACTTCCTCAGCATCTTCCTCAGTTTTTGGGCTTCCTCTGTTTTTTGGGACTGAAAAAGTTAGCCAAGTTTTGCCCCTCGCAGATTTCGACCCTCTTGAAGCCAGACCTTCTTCTTCATCCATTGAAGAATTGCACGAGCTCTGGAAGCCTTTCTTCCCCAAATCATCCAAACCCCCTTCTTCATCGTCTTCACTGGTTTCTCCTCTGTCTCCTTCTTCTTCCACCTTCTCCTACAATTCTCCCTCTGCCCCCACCAAACCTGTTCAGACACAGCAGAAACAACGGAATCTGCATCCTAAGAACAGGTTGTCTCATGCTGGTCCTGTCTCCACCATACCAAGATCTAAAAGGAGGAAGAATCAGCTGAAGAAAGTTTGTCAGGTTCCAGCTGAGTCTCTTTCCTCTGATATCTGGGCATGGCGGAAATATGGCCAGAAACCCATCAAAGGCTCTCCGTATCCAAGGGGATATTACAGGTGTAGCAGCTCGAAAGGATGCTTAGCTCGGAAACAAGTGGAGAGGAACAGATCCAACCCGTCGATGTTCATAGTCACCTACACTGCGGAGCACAACCATCCTGCTCCTACTCATCGGAACTCTCTCGCCGGCTCCACCCGTCAGAAGCCCTCGACCGCAGCCGGCGGCGGCGGTGAAACAGACAAAGCCCCGTCGAAAGCCGGTTCTCCGGCGACCTCTGGTGTGGAAGAAGAAGAGACAGTACCTCAAAGCACAGACTTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGATGATGAGATCGGGTTATCAGATTCGGTGTTAACAGATGATTTCTTTGAAGGATTAGATGAACTTACAGGGCCGTTGCCTCCGTCGGCAGCGGTGGCGCCCGTTACCGGAGACTGCTTCGCCGAACCCTTCTCTACTGGTTTCTCTCTCCCGGTATGGCCAACCACAAATGCCGCCCCCACCACCGCCGGTGGCAACTGTTGA 1065 0.5277 MEDDWDLHAVVRGCATVSSSSSSSSSATATSSASSSVFGLPLFFGTEKVSQVLPLADFDPLEARPSSSSIEELHELWKPFFPKSSKPPSSSSSLVSPLSPSSSTFSYNSPSAPTKPVQTQQKQRNLHPKNRLSHAGPVSTIPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSNPSMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTAAGGGGETDKAPSKAGSPATSGVEEEETVPQSTDFESKVEMEDLMEEDDEIGLSDSVLTDDFFEGLDELTGPLPPSAAVAPVTGDCFAEPFSTGFSLPVWPTTNAAPTTAGGNC 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0139 354 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0139 354 MobiDBLite consensus disorder prediction 84 126 - -
Lele43g0139 354 MobiDBLite consensus disorder prediction 221 241 - -
Lele43g0139 354 MobiDBLite consensus disorder prediction 16 35 - -
Lele43g0139 354 ProSiteProfiles WRKY domain profile. 158 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0139 354 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 310 IPR044810 GO:0003700
Lele43g0139 354 FunFam WRKY transcription factor 22 147 217 - -
Lele43g0139 354 SUPERFAMILY WRKY DNA-binding domain 161 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g0139 354 MobiDBLite consensus disorder prediction 217 278 - -
Lele43g0139 354 Gene3D WRKY domain 147 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g0139 354 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0139 354 MobiDBLite consensus disorder prediction 83 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0139 Lele-ChrLele43 1408599 1409918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0139 1 351 WRKY Transcription Factor Family AT4G01250 45.251 9.61e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele43g0139 WRKY 4.7e-25 CL0274