Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0137 ATGGGCGATTGTGATGATGGAGGAGACTTTGCTGGAACCATTTGCTCAATCTGCTACGAAGTTCTCAAGCCCATTGTCGAAGATCTCCAATCCATCAATATCTGCGGCCATGTCTTCCACGAGCTCTGTTTGCAGCAATGGTTCGAGTACTGTTCAACGGCAAAGAAATGCACTTGCCCTGTGTGCAAGCAGAGTTGTAAAGCGAGCGATGTTGCTCGGTTGTATTTCCAGTCTCTCGGAGAAGCGAAGGATGCTGTTCTTCCTGGGAAATCCGTTGGGTCAGAGGAGGAAGATTCGGGGGTTTTGCGTAGAGAAGTGAAAGTGTTGGAATTGAAAGTTTCGGGGCTTAGTTCAAAATTGGAGCAACAGGAGCAGAAATTGGGAGATGTTACTAATGAGCTTTGTGCTTGCAAAGAACAGGCAAAATTAGATGCAGGACTAAAAGACCAAGCGTTGAAACAAAGAGCATTCATTCAAAACCAGCTTCTTATGAAATCAGAGGAGCTTGAAAAGTCAACTTTGGAGTGTTCAAGATTGCAAGATAGAAATATGGCTCTGGCTAAAGAACTCGCAGCATTCAAATTAGTATTAGATCCGAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGTGCCAACAGTAAAGATACGATTGACACATTACGAAGATCTCTGGTCATGCGGAACAGGAGTTACAAAGAATTAATGACCAAGTGCAATATTCTAGGAAGAGGGGAGGCACGTTATAGTAGAAAGCTTGAGAAGGCTAAAGAGAAAATCAAGAAACTGAAGGAAAGGATACAGGAATTGGAAACAGCAGATGAAGTAAAAGAGAATGAAATCCTAAGGTCTCTGAAAGTTTCAAAGAAAACAGGTTGCTTAAAGAATCTTGAAAGCAATAGTAGTTATGATTCTGATCTGTTGTCAGCGGATAAAATTCCACCAAAAGAACATGGGAAGCAAATTTTGACACCACATTCCAGAACAGATCTCTCTGTGAACAACAATAATAAAGTGTTGCAATATGCAAATATGGAGAACATCAATGGTAAGGAAAGTAGACAAAATAAAGATGTGAATTTCATTAAAGAAAGTTCAACCAGGATGTCTCTTAATGGAGAGGAAAATTGCATCTCTCTTGATGAAGACGATTCAGAATTCCCTAAAGCTTGGCCAGGATTTACAAAATACAACTGTAAAGACCAAGACAGTGATACTGTTGCTCTTAGGAAGCCCACTCTAGCAAAGCGAGAGGCAGCTTCTAGTGTAGAGAGAGAAACAGCAATGAAAGAATACATCCTGGCTGAGCCTATAAGAGTTGACGTTAACAATGACTTAGGTAAGAATGCTGCTGGTATTATGTCTGAAGATGTGACATTACTAGACAATGTGAAACAAGTTGAGACCATTATTAACATTCGAAGAGAAAATCTATCTCCACCACCACTTTCCAGTCCAGGTGATGTTTGTTTTTCTGGCGGCTTACTTGGTCCTGATGGAACTAATCGATACTTGGGTAGATGGTGCAAGCGTGGAGAGAAAAAGGAATCAGTCACTCCAAAAGCTTCAATCAATGGTGATTTGATAGCTGTAGGGGCTGATGGTAGAGGTGGTAAAGTTAAAGTTCTGAGATCAAACCATACCTTCCAGGATTATAAGGAGAATTCAGTAGGCTCAAAAAGGATGAAATTCGGACCTAAAGCAAACAACATGCAGTCTCAGGGGTGTCTACAGATAGAACACTTCTTTGGGAGGGCGACAAAGTGGTTTCTTGTTCTATCATTTGGCCTACATTCAGGTTCTATTCTGCAAAAAGATGGAAGCATGTAA 1842 0.4099 MGDCDDGGDFAGTICSICYEVLKPIVEDLQSINICGHVFHELCLQQWFEYCSTAKKCTCPVCKQSCKASDVARLYFQSLGEAKDAVLPGKSVGSEEEDSGVLRREVKVLELKVSGLSSKLEQQEQKLGDVTNELCACKEQAKLDAGLKDQALKQRAFIQNQLLMKSEELEKSTLECSRLQDRNMALAKELAAFKLVLDPNLDEDEVLKLATLGNGANSKDTIDTLRRSLVMRNRSYKELMTKCNILGRGEARYSRKLEKAKEKIKKLKERIQELETADEVKENEILRSLKVSKKTGCLKNLESNSSYDSDLLSADKIPPKEHGKQILTPHSRTDLSVNNNNKVLQYANMENINGKESRQNKDVNFIKESSTRMSLNGEENCISLDEDDSEFPKAWPGFTKYNCKDQDSDTVALRKPTLAKREAASSVERETAMKEYILAEPIRVDVNNDLGKNAAGIMSEDVTLLDNVKQVETIINIRRENLSPPPLSSPGDVCFSGGLLGPDGTNRYLGRWCKRGEKKESVTPKASINGDLIAVGADGRGGKVKVLRSNHTFQDYKENSVGSKRMKFGPKANNMQSQGCLQIEHFFGRATKWFLVLSFGLHSGSILQKDGSM 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0137 613 Coils Coil 169 189 - -
Lele43g0137 613 Coils Coil 250 284 - -
Lele43g0137 613 CDD RING-H2 15 63 - -
Lele43g0137 613 Pfam Ring finger domain 14 63 IPR001841 -
Lele43g0137 613 SMART ring_2 15 62 IPR001841 -
Lele43g0137 613 ProSiteProfiles Zinc finger RING-type profile. 15 63 IPR001841 -
Lele43g0137 613 SUPERFAMILY RING/U-box 14 67 - -
Lele43g0137 613 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 107 IPR013083 -
Lele43g0137 613 PANTHER RING ZINC FINGER PROTEIN-RELATED 7 590 - -
Lele43g0137 613 Coils Coil 106 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0137 Lele-ChrLele43 1391092 1395445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0137 444 592 C3H Transcription Factor Family AT4G01270 38.750 2.11e-21 96.3