Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0130 ATGTCTCGCCGTACCAACCCGACTTCTCTCTCCCTAGTGGTCAGCCTTAACTGCATAGAAGACTGCTCCTTAGAGCAGCAATCCCTCGCCGCCGTCGCCGCCGTTGAGTACGTCCCCCTCAGCCGATTATCCGAAGGCAAGATAGAGTCCGCTTCCGCTGTGCTCCTTCACTCTCTCGCTTTTCTTCCCCGCGCTGCCCAACGCTGCCTCCGTCCCTATCAGCTTATTCTTTGCCTCGGCTCGGCTGACCGCTCTGTTGACTCCGCATTGGCTGATGACCTCGGCCTCCGCCTTGTACACGTGGACACCTCACGCGCCGAGGAGATCGCCGACACCGTTATGGCGCTTATCCTTGGCTTGCTCCGCCGAACTCACCTTCTCTCTCTCCACGCTCTCTCGTCTTCTGGCTGGCTCGGCTCGGTCCAGCCGCTGTGTCGGGGAATGAGACGCTGCCGTGGGCTGGTTCTGGGAATCGTAGGTAGATCTGCGTCGGCTAGGTCTTTGGCCACTCGAAGCTTGGCATTCAAAATGAGCGTGCTTTATTTCGATGTTCCGGCTCAGGTTGGCCGGTCTTCTGTAAACTTCCCCTCTGCAGCGCGCAGGATGGACACTCTTAACGATTTACTTGCTGCAAGTGACCTTATATCACTTCACTGTTCTGTAACAAACGAAACCATCCAAATTATCAATGCTGAATGTCTTCAACATGTAAAGCCTGGAGCTTTTCTTGTAAATACGGGTAGCAGTCAGCTACTGGATGATTGTGCTGTGAAGCAGCTTTTGATTGACGGAACCTTGGCTGGATGTGCTTTGGATGGTGCAGAAGGACCTCAATGGATGGAAGCATGGATAATCTTAATGTGGGATAGTGGCCTGTGTCCCACACCAGGACATGTCTGTAGGCCTTTTCTGAGTTGCGATCAACAGCATCATGTCTGCTGTAGATGCAGAGATGTTGTAAAGGAGATGCCAAATGTGTTAATACTTCCACGAAGTGCAAATTATAGTGAAGAAGTTTGGATGGAGATAAGGGAGAAAGCTATATCTATATTGCAAGCATACTTTCTTGATGGAGTTGTTCCGGAAAACGTGGCATGTGACAATGATGAGGATGGAGAGGAGAGGGCAGTTAGTGATGAGAATGAACAAGCGGATCAACTAGAGAAAGAAATGGCTTTGCAGATCTCTATTAGAGAGCAAACAGATGACATTCACATATGCAGTGAATCAAGGAAAGGAGATAATCAAGTTAAATTTTCCTCCCAGCACCAATCTTCTGGTTTGACTCAAAGCAACAGTGGCCCATCTGGAGGAAGACGCAGCAGGTCAGGTAAAAAGGCTAAGAGGAGGCACGCGCGTAAAAGCTCTCAACAAAAATCAGAAGATCCTTCTATACTGGAGAAAGAAAATACGTCTCTGAGAGTAGAAGATACTGCTATGAGTGGCACTGATCAAGCTTTTAGCTCCAGCTCTTGGGGTACTCCCCCTGAGGATTCAAGAGGTAGAAAAACTCCGGTAGAATATGTGCAGGAATCAACTAGCAACCAACTACTGAAGTCAAACACGAGGCTCAGTGGAGAGTGTAGTGAACTGTTGAGAGATGGATATGTTATTGCTCTATATGCAAGAGACTGCTCTGCACTCTACGTCTCGAGGCAAAGAGTTCGAGGTGGAGATTGTTTTCTTGAGGTCATGTCAAATGTGTCAAAAAGGGACCCTGCTGCACAATTTCTCGTCATCTTCAGAAGCAAGGACATAATTGGTTTGCGATCTCTTGCTGCCGGTGGAAAGTTGCTGAAGATCAATAGGAAAATGGAATTTGTGTTTGCCAGTCACAGCTTTGATGTATGGGAGGAATGGACACTTGAAGGTTCCTCACAGGAATGTAGGCTGGTGAACTGTAGAAATACATCCGCTGTTTTAAATGTACGTGTTGAGATTCTGGCATGGGAGGGCGAAGACGGTGTCACTCGCTGGCTTGACTAG 1986 0.4859 MSRRTNPTSLSLVVSLNCIEDCSLEQQSLAAVAAVEYVPLSRLSEGKIESASAVLLHSLAFLPRAAQRCLRPYQLILCLGSADRSVDSALADDLGLRLVHVDTSRAEEIADTVMALILGLLRRTHLLSLHALSSSGWLGSVQPLCRGMRRCRGLVLGIVGRSASARSLATRSLAFKMSVLYFDVPAQVGRSSVNFPSAARRMDTLNDLLAASDLISLHCSVTNETIQIINAECLQHVKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWIILMWDSGLCPTPGHVCRPFLSCDQQHHVCCRCRDVVKEMPNVLILPRSANYSEEVWMEIREKAISILQAYFLDGVVPENVACDNDEDGEERAVSDENEQADQLEKEMALQISIREQTDDIHICSESRKGDNQVKFSSQHQSSGLTQSNSGPSGGRRSRSGKKAKRRHARKSSQQKSEDPSILEKENTSLRVEDTAMSGTDQAFSSSSWGTPPEDSRGRKTPVEYVQESTSNQLLKSNTRLSGECSELLRDGYVIALYARDCSALYVSRQRVRGGDCFLEVMSNVSKRDPAAQFLVIFRSKDIIGLRSLAAGGKLLKINRKMEFVFASHSFDVWEEWTLEGSSQECRLVNCRNTSAVLNVRVEILAWEGEDGVTRWLD 661
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0130 661 Coils Coil 370 390 - -
Lele43g0130 661 MobiDBLite consensus disorder prediction 366 386 - -
Lele43g0130 661 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 276 IPR006140 GO:0051287
Lele43g0130 661 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 29 126 - -
Lele43g0130 661 Gene3D - 106 334 - -
Lele43g0130 661 MobiDBLite consensus disorder prediction 413 439 - -
Lele43g0130 661 PANTHER C-TERMINAL BINDING PROTEIN AN-RELATED 5 287 IPR045015 GO:0000226
Lele43g0130 661 MobiDBLite consensus disorder prediction 475 497 - -
Lele43g0130 661 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 108 280 IPR036291 -
Lele43g0130 661 MobiDBLite consensus disorder prediction 409 504 - -
Lele43g0130 661 Gene3D - 29 354 - -
Lele43g0130 661 MobiDBLite consensus disorder prediction 455 474 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele43g0130 Lele-ChrLele43 1323886 1327413 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1265 41 21438221 21440388 Lele43g0130 43 1323886 1327413 hybridization
Lele42g1220 42 24368972 24371295 Lele43g0130 43 1323886 1327413 hybridization