LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0130	ATGTCTCGCCGTACCAACCCGACTTCTCTCTCCCTAGTGGTCAGCCTTAACTGCATAGAAGACTGCTCCTTAGAGCAGCAATCCCTCGCCGCCGTCGCCGCCGTTGAGTACGTCCCCCTCAGCCGATTATCCGAAGGCAAGATAGAGTCCGCTTCCGCTGTGCTCCTTCACTCTCTCGCTTTTCTTCCCCGCGCTGCCCAACGCTGCCTCCGTCCCTATCAGCTTATTCTTTGCCTCGGCTCGGCTGACCGCTCTGTTGACTCCGCATTGGCTGATGACCTCGGCCTCCGCCTTGTACACGTGGACACCTCACGCGCCGAGGAGATCGCCGACACCGTTATGGCGCTTATCCTTGGCTTGCTCCGCCGAACTCACCTTCTCTCTCTCCACGCTCTCTCGTCTTCTGGCTGGCTCGGCTCGGTCCAGCCGCTGTGTCGGGGAATGAGACGCTGCCGTGGGCTGGTTCTGGGAATCGTAGGTAGATCTGCGTCGGCTAGGTCTTTGGCCACTCGAAGCTTGGCATTCAAAATGAGCGTGCTTTATTTCGATGTTCCGGCTCAGGTTGGCCGGTCTTCTGTAAACTTCCCCTCTGCAGCGCGCAGGATGGACACTCTTAACGATTTACTTGCTGCAAGTGACCTTATATCACTTCACTGTTCTGTAACAAACGAAACCATCCAAATTATCAATGCTGAATGTCTTCAACATGTAAAGCCTGGAGCTTTTCTTGTAAATACGGGTAGCAGTCAGCTACTGGATGATTGTGCTGTGAAGCAGCTTTTGATTGACGGAACCTTGGCTGGATGTGCTTTGGATGGTGCAGAAGGACCTCAATGGATGGAAGCATGGATAATCTTAATGTGGGATAGTGGCCTGTGTCCCACACCAGGACATGTCTGTAGGCCTTTTCTGAGTTGCGATCAACAGCATCATGTCTGCTGTAGATGCAGAGATGTTGTAAAGGAGATGCCAAATGTGTTAATACTTCCACGAAGTGCAAATTATAGTGAAGAAGTTTGGATGGAGATAAGGGAGAAAGCTATATCTATATTGCAAGCATACTTTCTTGATGGAGTTGTTCCGGAAAACGTGGCATGTGACAATGATGAGGATGGAGAGGAGAGGGCAGTTAGTGATGAGAATGAACAAGCGGATCAACTAGAGAAAGAAATGGCTTTGCAGATCTCTATTAGAGAGCAAACAGATGACATTCACATATGCAGTGAATCAAGGAAAGGAGATAATCAAGTTAAATTTTCCTCCCAGCACCAATCTTCTGGTTTGACTCAAAGCAACAGTGGCCCATCTGGAGGAAGACGCAGCAGGTCAGGTAAAAAGGCTAAGAGGAGGCACGCGCGTAAAAGCTCTCAACAAAAATCAGAAGATCCTTCTATACTGGAGAAAGAAAATACGTCTCTGAGAGTAGAAGATACTGCTATGAGTGGCACTGATCAAGCTTTTAGCTCCAGCTCTTGGGGTACTCCCCCTGAGGATTCAAGAGGTAGAAAAACTCCGGTAGAATATGTGCAGGAATCAACTAGCAACCAACTACTGAAGTCAAACACGAGGCTCAGTGGAGAGTGTAGTGAACTGTTGAGAGATGGATATGTTATTGCTCTATATGCAAGAGACTGCTCTGCACTCTACGTCTCGAGGCAAAGAGTTCGAGGTGGAGATTGTTTTCTTGAGGTCATGTCAAATGTGTCAAAAAGGGACCCTGCTGCACAATTTCTCGTCATCTTCAGAAGCAAGGACATAATTGGTTTGCGATCTCTTGCTGCCGGTGGAAAGTTGCTGAAGATCAATAGGAAAATGGAATTTGTGTTTGCCAGTCACAGCTTTGATGTATGGGAGGAATGGACACTTGAAGGTTCCTCACAGGAATGTAGGCTGGTGAACTGTAGAAATACATCCGCTGTTTTAAATGTACGTGTTGAGATTCTGGCATGGGAGGGCGAAGACGGTGTCACTCGCTGGCTTGACTAG	1986	0.4859	MSRRTNPTSLSLVVSLNCIEDCSLEQQSLAAVAAVEYVPLSRLSEGKIESASAVLLHSLAFLPRAAQRCLRPYQLILCLGSADRSVDSALADDLGLRLVHVDTSRAEEIADTVMALILGLLRRTHLLSLHALSSSGWLGSVQPLCRGMRRCRGLVLGIVGRSASARSLATRSLAFKMSVLYFDVPAQVGRSSVNFPSAARRMDTLNDLLAASDLISLHCSVTNETIQIINAECLQHVKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWIILMWDSGLCPTPGHVCRPFLSCDQQHHVCCRCRDVVKEMPNVLILPRSANYSEEVWMEIREKAISILQAYFLDGVVPENVACDNDEDGEERAVSDENEQADQLEKEMALQISIREQTDDIHICSESRKGDNQVKFSSQHQSSGLTQSNSGPSGGRRSRSGKKAKRRHARKSSQQKSEDPSILEKENTSLRVEDTAMSGTDQAFSSSSWGTPPEDSRGRKTPVEYVQESTSNQLLKSNTRLSGECSELLRDGYVIALYARDCSALYVSRQRVRGGDCFLEVMSNVSKRDPAAQFLVIFRSKDIIGLRSLAAGGKLLKINRKMEFVFASHSFDVWEEWTLEGSSQECRLVNCRNTSAVLNVRVEILAWEGEDGVTRWLD	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0130	661	Coils	Coil	370	390	-	-
	Lele43g0130	661	MobiDBLite	consensus disorder prediction	366	386	-	-
	Lele43g0130	661	Pfam	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	114	276	IPR006140	GO:0051287
	Lele43g0130	661	SUPERFAMILY	Formate/glycerate dehydrogenase catalytic domain-like	29	126	-	-
	Lele43g0130	661	Gene3D	-	106	334	-	-
	Lele43g0130	661	MobiDBLite	consensus disorder prediction	413	439	-	-
	Lele43g0130	661	PANTHER	C-TERMINAL BINDING PROTEIN AN-RELATED	5	287	IPR045015	GO:0000226
	Lele43g0130	661	MobiDBLite	consensus disorder prediction	475	497	-	-
	Lele43g0130	661	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	108	280	IPR036291	-
	Lele43g0130	661	MobiDBLite	consensus disorder prediction	409	504	-	-
	Lele43g0130	661	Gene3D	-	29	354	-	-
	Lele43g0130	661	MobiDBLite	consensus disorder prediction	455	474	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0130	Lele-ChrLele43	1323886	1327413	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele41g1265	41	21438221	21440388	Lele43g0130	43	1323886	1327413	hybridization
	Lele42g1220	42	24368972	24371295	Lele43g0130	43	1323886	1327413	hybridization