Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0129 ATGGTGTCCGTGAACCCAAATCCAGCTCAAAGTTTTTACTTCTTCGATCCCATGAATACCGGCGTTACCGGTTTCAATCACCCTCTGCCGCCCCCAACGGCGACTCCGGCCGCTGCCAATACGTATGCGGATGATCCGAACAAGAAGATCCGAAAACCGTATACGATTACTAAGTCCCGAGAGAACTGGTCCGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTCGACCGTGATTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAAAATGGTACTAGTGAACATGTACCTCCTCCGCGGCCGAAGAGAAAAGCTGCTCATCCTTATCCACAAAAGGCCCCTAAAAATGCTGCATTGGTATCTCAAGGCACCGGACCAATGCAATCTTCATCTGCTTTTGCTGAGCCTGCATACATTTATAGGCCAGATTCATCATCCGTGATCGGAACACCGGTTACCAGTGTGCCTTTGTCATCTTGGAATTGTAATGCTATGCCGCCTGTCAGCATGCCGCAAGTGGCTAAAGATGATAGGGGATTGGTTGGACAAGCCGTTCCTCGTAATTGTTGCTATAGCAGTAGTAACGAGAGCACTCCCGGACTTTGGCCTAATAATAATGGTATAGAGCAAGTGGACCAAGGCAAGCCGATAACAGTAATGCCAGATTTTGCACAAATCTATCGGTTCATCGGTAGCGTGTTCGATCCAAATGCAACTGATCATCTACAGACACTGAAAAAGATGGACCCAATAAATGTGGAAACAGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAACGAACCCTAAGTTTAAGGATCACCAGAAGTTGCTTTCGGCGTATGATGTAGAACCGGGTAAAGTGAAGACCGGTGGTCTTTACAATGATCCACTGACTCACAAATCCGAGAGTGCTGTTCTGTCTGCTTAG 996 0.4588 MVSVNPNPAQSFYFFDPMNTGVTGFNHPLPPPTATPAAANTYADDPNKKIRKPYTITKSRENWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALVSQGTGPMQSSSAFAEPAYIYRPDSSSVIGTPVTSVPLSSWNCNAMPPVSMPQVAKDDRGLVGQAVPRNCCYSSSNESTPGLWPNNNGIEQVDQGKPITVMPDFAQIYRFIGSVFDPNATDHLQTLKKMDPINVETVLLLMRNLSINLTNPKFKDHQKLLSAYDVEPGKVKTGGLYNDPLTHKSESAVLSA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0129 331 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Lele43g0129 331 Gene3D - 62 110 - -
Lele43g0129 331 MobiDBLite consensus disorder prediction 109 134 - -
Lele43g0129 331 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Lele43g0129 331 PANTHER SWI/SNF COMPLEX-RELATED 36 289 - -
Lele43g0129 331 SMART sant 59 107 IPR001005 -
Lele43g0129 331 CDD SANT 62 105 IPR001005 -
Lele43g0129 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Lele43g0129 331 ProSiteProfiles SANT domain profile. 58 111 IPR017884 -
Lele43g0129 331 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Lele43g0129 331 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Lele43g0129 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0129 Lele-ChrLele43 1318933 1321096 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele43g0129 Myb_DNA-binding 7.7e-11 CL0123