Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0123 ATGATATCACCTAAAGGCTCTCAAATGTCCCCCAAACTTCTTGTAATATTAAATTCTTTTGAGGCAACACTGGCAGAGAGGCTGAAGAAGCTTATGCCGAAAAACAAGGATGAAATTCTTAGTATATCTTGGATGACTCTAGCAATGGAATCACTTTGTGAAACTCATAATAATATAAAAACCCTTGCCATAGAAATTGCACTCCCTGTGAGTGAATGGGATGAAAAATGGATTGATGTGTACTTAGACATAAGTGTAAAGTTGCTAGATTTATGCATTGCATTTAGTTCTGAGCTCTCACGCCTGAACCAGGGGCATCTTTTGCTTCAGTGTGCGTTACACAATTTAAACACTCCCTCCCCACAGCAGATTGTTCGAGCATGTTCTTCAATCGACGGATGGAGGCATCATATTAGTTCTAGGAATCCTAGGATTGAGAAATGTGGCACCATTTTAGATAATCTTCTGGGATCACTGGATTTGCCAAAGGTTAAGAATTCAGCTAAAGGGAAGGTTTTGATGCGAGCTATGTATGGAGTGAAGGTGCAGACAGCATTTTTATGCAGTGTGTTTGCTGCGGTTTTCTCAGGCTCTGCAGAGAAGTTGTTTGATCGGAATGTAGCTGACACATATGTGTGGGCTCAAACTTTTACAAGTTTGCAGCATGTTGTAAATGAGGAAATTGAAGTTAGATTTTCCAACGGAAGATTTGCTGTATTGAAGGAGTTGGAAGCAGTCAATGCCTTTGTGAAGAAATTATACCCTATAATCCAGGGGGAACAAGATACTGTTGAGACAGACGCTCTTCTGAAGACTGTCGAGGAAACAAGCAAAGCAGCAGAGAAGCTTTCACAAGGATTAGATCATCTTGCAAAGGAAGTGGATGGTTTTTTCCGAGTAGTCTTATCTGGTCGTGACACTTTGCTATCTTCTCTGAGGTCAGGTGTATCTTTCTGCGACGGTATCCCTGGGGGTATTATGGATGAGCAGAGAGTCAGTTGA 1002 0.4132 MISPKGSQMSPKLLVILNSFEATLAERLKKLMPKNKDEILSISWMTLAMESLCETHNNIKTLAIEIALPVSEWDEKWIDVYLDISVKLLDLCIAFSSELSRLNQGHLLLQCALHNLNTPSPQQIVRACSSIDGWRHHISSRNPRIEKCGTILDNLLGSLDLPKVKNSAKGKVLMRAMYGVKVQTAFLCSVFAAVFSGSAEKLFDRNVADTYVWAQTFTSLQHVVNEEIEVRFSNGRFAVLKELEAVNAFVKKLYPIIQGEQDTVETDALLKTVEETSKAAEKLSQGLDHLAKEVDGFFRVVLSGRDTLLSSLRSGVSFCDGIPGGIMDEQRVS 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0123 333 Coils Coil 273 293 - -
Lele43g0123 333 PANTHER BPS1-LIKE PROTEIN 8 312 - -
Lele43g0123 333 Pfam Protein ROH1-like 17 118 IPR008511 -
Lele43g0123 333 Pfam Protein ROH1-like 206 309 IPR008511 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele43g0123 Lele-ChrLele43 1292446 1293447 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1273 41 21465455 21471122 Lele43g0123 43 1292446 1293447 hybridization
Lele42g1226 42 24395918 24396976 Lele43g0123 43 1292446 1293447 hybridization