Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0122 ATGTCAAACAATATAAGATATATGGAAAGTGCTTTATGTGAACTTGCAAGCTGGAAATCTCTTGGGCGAAGTTCGGCAACCTCGAATCAAATTCAATCCCCAGTATCTATTGGGGCTTATAGGGTTGCTGAAATTCCTGCAAGAGGTAGTGAATCCGGTGAGTACCTTGTGCTATTTAATCTGCATAGAATCGGACCTCTCAAGCAAAGTTCTCAAGACATGTCTTTTGAATCACTCTCTGCTTCAGCTGAGCACAAAGGGCTGCCCACTCATGGTGGTCGCTACATTCAGTACAATGTGTACGGAAACCTATTCGAGGTTTCGAGAAAGTACTTGCCTCCTCTTCGGCCTGTTGGCAGAGGTGCTTACGGTATTGTTTGTGCTGCTGTAAATGCTGAGACACGTGAGGAAGTTGCGATTAAGAAGGTTGGCAATGCATTCGACAACAGAATAGATGCCAAAAGGACTTTACGCGAAATTAAACTGCTTCGGCATTTGGATCATGAAAATGTCATAGCCCTCAAAGACATCATTCGACCTCCACAAAAGGAGAATTTCAATGATGTATACATTGTATCTGAGTTAATGGACACTGATCTGCACCAAATAATACGTTCCAATCAGGCGTTGACTTCTGATCATTGTCGGGTTGGCACTTCAACTATTTGTTTTGGCTTATGA 681 0.4273 MSNNIRYMESALCELASWKSLGRSSATSNQIQSPVSIGAYRVAEIPARGSESGEYLVLFNLHRIGPLKQSSQDMSFESLSASAEHKGLPTHGGRYIQYNVYGNLFEVSRKYLPPLRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHLDHENVIALKDIIRPPQKENFNDVYIVSELMDTDLHQIIRSNQALTSDHCRVGTSTICFGL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0122 226 Gene3D Phosphorylase Kinase; domain 1 89 216 - -
Lele43g0122 226 FunFam Mitogen-activated protein kinase 97 206 - -
Lele43g0122 226 SMART serkin_6 112 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0122 226 ProSitePatterns Protein kinases ATP-binding region signature. 118 142 IPR017441 GO:0005524
Lele43g0122 226 Pfam Protein kinase domain 116 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0122 226 ProSiteProfiles Protein kinase domain profile. 112 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0122 226 SUPERFAMILY Protein kinase-like (PK-like) 115 226 IPR011009 -
Lele43g0122 226 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 110 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0122 Lele-ChrLele43 1288669 1292280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0122 71 226 MAP Kinase Gene Family AT4G01370 75.000 2.48e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele43g0122 Pkinase 4.5e-18 CL0016