Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0107 ATGAAAAGTCCAACATCCAATACACGTCGCCGGAGCTCCCGCTCCGGCTACCGCACGCCAGACCACCGCCACTTCTACTCTCCCAGCTATGATTCCTCCGGGGTTAGCACCACCATCGTCAAGTCAAACTCCTCTAGGAAGCCATTCGCGGCTGCCGCTAGATCAGTGGCTGCTGTTTTTGTTGCTTGCTTCACCCCACCGGATGAGAGTAACTCGAAGAGCTTCGTGGATTCTCAAGAGTTCAAAGCTTCATCTTCCTCCTCCGTTGTATCTGATTCTTCGGGAGCTGGTAGTCAGAGAACGCATGGTTCAAATAGACGAATCAGTTCCAGTTCATACAAGTCAACCCAGGCAAAAGGGCCTAGATCTCTGAATTTCACCATGGAGGATATCTTCCGAGCCACAAGAAACTTCTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTATACAAGGCAAGTTTCCCGGACGGAACTTTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAGCATTCGGGTTCTGAGTTCCAAAGTGAGATCCAGACGTTATCACGGGTTGAACATTTGAATTTGGTCAAATTCTATGGATATTTGGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTTTGTCCCAAATGGAACCCTTAGAGAGCACTTAGATTGCATTCGTGGGAACATTTTGGACCTCGCTTCTCGTCTAGACATCGCGATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTCTTACTGAAAATTTTCGAGCTAAGGTAGCAGATTTTGGTTTTGCGAGACAGGCACCTGACAGTGATTCTGATGTGACTCATGTATCCACCCAAGTTAGAGGAACCGCCGGCTACTTGGATCCTGAATATCTCAGAACCTATCAACTTACTGAGAAGAGTGATGTCTATTCATTTGGCGTTTTACTTGTTGAACTTGTCACCGGCAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGCGAATCACTGCAAAATGGGCTATGAAGAGATTCATTGAGGGCGATGCCATATCAGTGTTGGACCCGAAACTAGATCAGAATGCTGCAAATAATCTGGCGCTAGAAAAGATACTTCAACTGGCCTTGCAGTGTTTGGCACCTCGAAGACAAAGCAGGCCTGGTATGAAGAGATGTGCTGAGATCCTTTGGACCATCCGTAAGGATTACAGAGAGCTATCAGCTTCAGATTTTCGTTCATTTTCCTCTTCTCCCCAGAGAATTGCATCAGTAAAAGAGTGA 1332 0.4557 MKSPTSNTRRRSSRSGYRTPDHRHFYSPSYDSSGVSTTIVKSNSSRKPFAAAARSVAAVFVACFTPPDESNSKSFVDSQEFKASSSSSVVSDSSGAGSQRTHGSNRRISSSSYKSTQAKGPRSLNFTMEDIFRATRNFSPAYKVGQGGFGTVYKASFPDGTFVAVKRAKKSLYEKHSGSEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEFVPNGTLREHLDCIRGNILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSDVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFIEGDAISVLDPKLDQNAANNLALEKILQLALQCLAPRRQSRPGMKRCAEILWTIRKDYRELSASDFRSFSSSPQRIASVKE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0107 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 99 215 - -
Lele43g0107 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 216 427 - -
Lele43g0107 443 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Lele43g0107 443 Gene3D Phosphorylase Kinase; domain 1 98 215 - -
Lele43g0107 443 SUPERFAMILY Protein kinase-like (PK-like) 119 416 IPR011009 -
Lele43g0107 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele43g0107 443 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0107 443 MobiDBLite consensus disorder prediction 1 41 - -
Lele43g0107 443 CDD STKc_IRAK 144 413 - -
Lele43g0107 443 MobiDBLite consensus disorder prediction 86 120 - -
Lele43g0107 443 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Lele43g0107 443 PANTHER OS01G0750732 PROTEIN 34 433 - -
Lele43g0107 443 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0107 443 Pfam Protein kinase domain 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0107 Lele-ChrLele43 1174075 1176422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0107 92 417 Receptor kinase-like Gene Family AT1G30570 41.104 4.12e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele43g0107 Pkinase 4.5e-50 CL0016