Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0092 ATGCGCGCGAGAGCTAGCAGTGGAGCTGGAAATTGGGCCTTTGACGTGAATAAAGCTAGGGTTTTGATTGGCAATCCCGCAAAATCTAAGAGCTTTCGAAAAATAACGGATGATGATACAAACTACCACATGGACATGATAGTTGGCCTTGCCAACATGAGGGCTAGAAATTACAATAGTCCAGAAATTGACAAGCTCAAAGCTAAGGGGAGGAATTTCCATTACAGAAGCAGGAGAAAAAAGTGTTTATTTGGGGTTTTTCATGGTTTTGGAGACAGCATTGCTGTGGCGAGTCCTGTGCTGGCAATTCCACGAAGTTTCAGTTCTGTGAGGTTGCCTCAAGATTTTGGGGTCACCGGCGGCAACATGGCCGGGATGGGAGAAATTGTAGAAGAGCCTAAAACAAGTGTGGTTGATGATGACACTATCTATGTTTCTGTGACAAAAGATTTGAAAGAGAGCAAGTCAAATCTGACATGGGCAATTCAAAACTTTGGAGGAAACAAGATTTGCATCCTCCATGTTCATGTCCCTGCAACTATGATCCCCCTGATGGGCACTAAATTTCCAGCAAGTTCATTGAAAGAACAGGAAGTTGAAGCATACAGGAAACTTGAAAGGCAAAACATGCATAAGAATCTAAACGAATATCTTCTGTTATGTTCACGAATGGGGGTCCGGGCAGAGAAGTTGCATTTGGAAATAGAAAGCATTGAGAAAGGTATTTTAGAGCTCGTCTCTCGGTATGGTATCCGTAAGCTTGTCATGGGAGCAGCATCTGATAATCGTCATTCTAGGAAAATGATGGACCTCAAATCTAAGAAAGCCATTTATATGAGTAAACATGCTCCAGCTTATTGTCAAATACGGTTTGTCTGCAAAGGGCGCCTTATACACACTAGAAATCGCTGCTTGGATGATGGTAATGAAGAGGCTGCATCACCTTTGCCACAGCAGAGGCCAAACCCTGAAGCTGTGCATTCACTCCAGTTGAGGTCTCAATCTGTTACGATGTGGCAGAATAATAGGGAAAAGCTTGAGATACTTCCCAGAGCAAGGTCTGCAATTTCTGGGCATGAAGGAATAACAGTGACCTTTTCTTCTCCAGATCCTGAAGGGTTTTCAAGTCCAAGTAACAGATGGGGTACAGAAGTTAATACTAATGGATCAGATGGGGTGTTAAGGAAGAGTCCTTCAGTTTTCTCGACATGTTCTGAAAATGCATTGACTCCAAAATTGATTTTTGAGAATGTAATAGACTCAAGTGAATTCTCTCCAGTTATAGCAAGTCTCCGTTTTTCATATCCTCCTAGTGTACTGGATGGAGGAATGGATGAATCTCTCTACTATCACCTTCAACAAGCCGTGTCTGAAGCTGAGAATGCTAGACGGGAGGCCTTTCAAGAAACACTTAAGCGTCGGAAAGCTGAAAACGATGCACTTGATGTAATGCGAAGGGCTAAAGCCTCTGAAAGCTTGTATAAAGAAGTACTTAAACAAAGGAAACAAGCTGACGAAGAACTAGAAAAAGAAAGAGGAGAACTTGAAGGGATGAAGCGCGAGAGAGACAAAGTTAAGGAAGAACTTAGACTTGCCCAAGATCAAAAGCTGTCTTTGGAGAGGCAAATTGAATCATCTGAATTCATGGTAAGAGAGTTAGAACAGAAGATCATATCTGTTGTGGATCTGTTGACAATGTACAAGAAAGAAAGAGACGAGTTACAGATGCAGCGCAATGATGCATTGAAAGAAGCCGAGGAGTTGAGGGAAAAACAAGGAGAGGTTTCAAGAGTACGTGGGCCTGTTGAGTCGTTTTCAGAGTTCTCTTTTCAAGAGATTGAACAAGCAACAAGGAACTTCAATTCATCCCTAAAGATTGGAGAAGGAGGATATGGAAATATCTATAAAGCTACCTTGCGTCAAACCGAGGTGGCCATAAAGATGTTGCATGCAAACAACAACTCGCAAGGACCTGCAGAGTTTATGCAGGAGGTTGATGTATTGAGTAAGTTAAGACATCCCAACCTTGTTACACTCATAGGAGCCTGCCCAGAATCCTGGACTCTCGTCTACGAATATCTACCAAATGGAAGCCTTGAAGATCGACTCAATTGCAAGGATAACACAGCTCCTTTATCATGGCAAACTCGAATCCGCATTGCTGCTGAGCTCTGCTCTGCTCTCATCTTCCTCCATTGCTGCAAACCTCACGCCATAGTTCATGGAGACTTGAAACCTTCAAATGTTCTACTTGATGCGAACTTTGTCAGCAAGCTTAGTGACTTTGGAATTTGCCGTATATTATCCAATACTGAGACTTCAGGTGGTGGTGGTGATGCTACAGATTGTTGGAGAACTGATCCTAAGGGTACTTTAGCCTACATGGATCCCGAATTTCTCGTTACCGGCTATCTCACGCCGAAATCAGATGTTTATTCATTTGGAATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGGATAACAAAGGAAGTGCAATATGCATTAGACACTGGAAAGTTTAAATCCCTATTGGATCCTTTGGCTGGAGATTGGCCATTTGTGCAAGCTCAACAGTTGGCTCGTGTGGCTCTAAGGTGTTGTGAGTTGGCTCGAAAGAATCGGCCGGATATTCGTTCCGATGTCTGGAAAATTCTGGAAGCAATGAGTGCTTTTTCTGGAGGCACAGACTCCTTTAAACTAGCTTATGGAGGCTCTGAGCAACCTCCTTCGTCTTTTATTTGTCCAATCTTTCAGGAAATGATGCTAGATCCGCATATTGCAGCAGATGGATTTTCGTATGAAGGTGAGGCAGTACGAGGATGGCTGGATAGTGGTCATGACACGTCACCCATGACAAATGGAAAGCTTCAACATCGTAATATTGCACCAAACCACACTCTACGCTCTGCAATTCAGGACTGGCTACAGCATCATCACTGA 2949 0.4313 MRARASSGAGNWAFDVNKARVLIGNPAKSKSFRKITDDDTNYHMDMIVGLANMRARNYNSPEIDKLKAKGRNFHYRSRRKKCLFGVFHGFGDSIAVASPVLAIPRSFSSVRLPQDFGVTGGNMAGMGEIVEEPKTSVVDDDTIYVSVTKDLKESKSNLTWAIQNFGGNKICILHVHVPATMIPLMGTKFPASSLKEQEVEAYRKLERQNMHKNLNEYLLLCSRMGVRAEKLHLEIESIEKGILELVSRYGIRKLVMGAASDNRHSRKMMDLKSKKAIYMSKHAPAYCQIRFVCKGRLIHTRNRCLDDGNEEAASPLPQQRPNPEAVHSLQLRSQSVTMWQNNREKLEILPRARSAISGHEGITVTFSSPDPEGFSSPSNRWGTEVNTNGSDGVLRKSPSVFSTCSENALTPKLIFENVIDSSEFSPVIASLRFSYPPSVLDGGMDESLYYHLQQAVSEAENARREAFQETLKRRKAENDALDVMRRAKASESLYKEVLKQRKQADEELEKERGELEGMKRERDKVKEELRLAQDQKLSLERQIESSEFMVRELEQKIISVVDLLTMYKKERDELQMQRNDALKEAEELREKQGEVSRVRGPVESFSEFSFQEIEQATRNFNSSLKIGEGGYGNIYKATLRQTEVAIKMLHANNNSQGPAEFMQEVDVLSKLRHPNLVTLIGACPESWTLVYEYLPNGSLEDRLNCKDNTAPLSWQTRIRIAAELCSALIFLHCCKPHAIVHGDLKPSNVLLDANFVSKLSDFGICRILSNTETSGGGGDATDCWRTDPKGTLAYMDPEFLVTGYLTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKFKSLLDPLAGDWPFVQAQQLARVALRCCELARKNRPDIRSDVWKILEAMSAFSGGTDSFKLAYGGSEQPPSSFICPIFQEMMLDPHIAADGFSYEGEAVRGWLDSGHDTSPMTNGKLQHRNIAPNHTLRSAIQDWLQHHH 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0092 982 ProSiteProfiles U-box domain profile. 910 982 IPR003613 GO:0004842|GO:0016567
Lele43g0092 982 ProSiteProfiles Protein kinase domain profile. 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0092 982 CDD RING-Ubox_WDSUB1_like 915 956 - -
Lele43g0092 982 SMART Ubox_2 914 977 IPR003613 GO:0004842|GO:0016567
Lele43g0092 982 SUPERFAMILY Protein kinase-like (PK-like) 601 881 IPR011009 -
Lele43g0092 982 SMART serkin_6 620 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0092 982 Coils Coil 487 556 - -
Lele43g0092 982 ProSitePatterns Protein kinases ATP-binding region signature. 626 647 IPR017441 GO:0005524
Lele43g0092 982 Gene3D HUPs 143 285 IPR014729 -
Lele43g0092 982 Gene3D Phosphorylase Kinase; domain 1 599 693 - -
Lele43g0092 982 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 910 982 IPR013083 -
Lele43g0092 982 Gene3D Transferase(Phosphotransferase) domain 1 694 898 - -
Lele43g0092 982 SUPERFAMILY RING/U-box 908 981 - -
Lele43g0092 982 Pfam Protein kinase domain 623 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0092 982 CDD STK_N 142 295 - -
Lele43g0092 982 Pfam U-box domain 912 981 IPR003613 GO:0004842|GO:0016567
Lele43g0092 982 Coils Coil 459 479 - -
Lele43g0092 982 FunFam receptor-like protein kinase FERONIA 583 693 - -
Lele43g0092 982 Pfam Ubiquitin-activating enzyme, SCCH domain 32 69 IPR019572 -
Lele43g0092 982 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 153 268 - -
Lele43g0092 982 Coils Coil 564 591 - -
Lele43g0092 982 PANTHER OS02G0152300 PROTEIN 143 976 - -
Lele43g0092 982 Gene3D - 16 71 IPR042063 -
Lele43g0092 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0092 Lele-ChrLele43 1055932 1068888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0092 94 981 U-box Gene Family AT2G45910 51.011 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele43g0092 Pkinase 1.4e-42 CL0016